Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3844 ATGAGGATGAATGCCTTCGTCGCTCTCTACCGTCACGCCGGCACCATTTCCATCCCCGCAAAATTACGACATGTAAGTGCAACTGAGATTACTTTAGGAAAATGTATGCCACTGGAATATCTGAGGAGGTTGGATTCCTGCCCCTGGCTGTTGCATCGATATTCATATTCAACTGGTTTCACTAACGTGCATGGCGAAACACCGTCTCCTGATTATGCAAGGAGGAGGAGGGAATCACTGGAAAATAAATTTGGGCTTACTCTTGGGACTTATAGCTCTAAAAGTTTCAATGCTATATACCGGTTTGGTCCCTTTTTGGCTTTGTATAGGGCTGCGGTTATTTCATTTCACGTCTTCAGGCTAACAATGTGGCAGTTGTTCGTTGAAGACATACAAAAACGAGCAGTTAAGTTTCGTGAAACTCTAATACGCTTGGGTCCTTTCTACATTAAGCTCGGACAGGCATTGAGCACTAGACCTGACATATTACCAACAGTATATTGTCAAGAGCTTGCTAAATTACAGGATCAAATACCTCCGTTTTCAACTGATATTGCAATCAGATGTATCGAAACCCAATTTGGTGCTCCTATTCATGAACTTTTTCGGGACATTAGCTCAGCTCCTATTGCAGCAGCATCGTTAGGACAGGTTTATAAAGCTCATCTGCATTCTGGAGAACTTGTAGCTGTAAAAGTTCAGAGGCCAGGCATGTCACTTTCATTGACCCTTGATGCTTTGCTGTTCCATATGATTGGGGGCCAATTTAAACGGTTTGCAAAGGCTCGCAAAGATCTTCTAGTAGCAGTTAATGAAATGGTCAGACACATGTTTGATGAAATCGATTATGTCCTAGAGGGGAAAAATGCCGAGCGATTTGCTTCTCTCTACTGTTCGTCTTCAAGCGGAGGTAATATAAAAAACAATAAAACAAAGTCAGTCAAAGCTCCCAAAATATATTGGGACTATACATGCACCACTGTACTGACTATGGAGTGGTTAGATGGAATTAAGCTTACAGATGAAACAGGTTTGAGTGAAGCTTCTTTAAACAGAAGGGAACTCATTGACCAGGGATTATACTGCTCTTTGAGGCAAATGCTCGAGGACGGTTATTTTCATGCTGATCCTCATCCGGGAAACCTTGTTGCGACAAATGATGGATCACTTGCATATTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTATCGTATTGGACTTATTCAAATTATTGTGCACTTTGTTAATCGCGACTCTCTGAGCTTGGCAAATGACTTCCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATATACATTTAGTTTCTAATGCACTGCAAGCATCCTTTTCTGATAGGAGTCAGCGGACCAGTGAGTCTCAAGATTTCCAGGGAGTCATGAACCAACTATATGATATCATGTATGAGTTTAACTTCTCCCTCCCACCAGACTATGCTCTTGTTATAAGAGCATTGGGATCACTAGAAGGGACAGCTAAAGTTCTGGATCCTGATTTTAAGGTCATTGAAAGTGCATATCCTTTTGTTATTGGAAGACTTATAGCAGATCCTAGTCCTGATATGAGAAGAATTTTGAGGGAACTTGTCATTTGTAATAATGGATCGATAAGGTGGAACCGGTTAGAGCGCCTGGTTGCAGCAATATCTGAACAAGCTTCAGAGCTAACCGAAGACCCTAATCCTGAAAAATTCTCAAGCCCTTCTGTTTGGAAATCATTTGATATGCATGCTGTCGTTGATTCCACAGAAGATCTTTTATTATTCATACTATCAGTGAAGGGTCAGAGAGTGCGTGTTTTCCTTCTTCGGGATATAGTAGAAGCAGCTGATGTGTTTCTGCAAGATGAAGTGATTGATTGTGCATTAAATGGGAATCGTCAAGACCAGAGGATATTGCGCTTTGAGGAGCGTACTGGGAAATCTTTTCATTACATTCGTGAGGTGGTGAAGTTGGCGCCAGGAGAGTGGACAACAATGCTTCTTCGGATGGCAGTGAAGCCTGAAGTTCACATATTTACTATAGACATTATTTCAGCTTTAGCTTTGCGTTCTAGTCACAGATTGCAAGTAGCCGCTTGGCTCTATTTGTCGATACTTTTACACAAATTATCAGATTAA 2142 0.4141 MRMNAFVALYRHAGTISIPAKLRHVSATEITLGKCMPLEYLRRLDSCPWLLHRYSYSTGFTNVHGETPSPDYARRRRESLENKFGLTLGTYSSKSFNAIYRFGPFLALYRAAVISFHVFRLTMWQLFVEDIQKRAVKFRETLIRLGPFYIKLGQALSTRPDILPTVYCQELAKLQDQIPPFSTDIAIRCIETQFGAPIHELFRDISSAPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQFKRFAKARKDLLVAVNEMVRHMFDEIDYVLEGKNAERFASLYCSSSSGGNIKNNKTKSVKAPKIYWDYTCTTVLTMEWLDGIKLTDETGLSEASLNRRELIDQGLYCSLRQMLEDGYFHADPHPGNLVATNDGSLAYFDFGMMGDIPRHYRIGLIQIIVHFVNRDSLSLANDFLSLGFIPEGVDIHLVSNALQASFSDRSQRTSESQDFQGVMNQLYDIMYEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPSPDMRRILRELVICNNGSIRWNRLERLVAAISEQASELTEDPNPEKFSSPSVWKSFDMHAVVDSTEDLLLFILSVKGQRVRVFLLRDIVEAADVFLQDEVIDCALNGNRQDQRILRFEERTGKSFHYIREVVKLAPGEWTTMLLRMAVKPEVHIFTIDIISALALRSSHRLQVAAWLYLSILLHKLSD* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3844 713 CDD ABC1_ADCK3-like 173 428 - -
Mtr3g3844 713 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 47 701 - -
Mtr3g3844 713 SUPERFAMILY Protein kinase-like (PK-like) 175 516 IPR011009 -
Mtr3g3844 713 Pfam ABC1 atypical kinase-like domain 173 425 IPR004147 -
Mtr3g3844 713 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 47 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3844 Mtr-Chr3 52232988 52241813 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3844 K08869 - gmx:100811652 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3844 3 52232988 52241813 Mtr3g3844 3 52232988 52241813 ECH