Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr3g3826 | ATGGCCGATTCAGATCACACTCAGTTCGACAACAACGACAACGATGATTTCGAAGTTCCTCTCACTCAAACTCAATCACCAATTCTCAAACCTCTCTCACAATCCAATAATCAAAATCAACGACCATCCAAGAAACCCAAAACCAACAAAACGACATCGTTCCCTGGCAAAGAGAACATTCCCCCTTTCGAAGGTTACGATATCGGTAACAGCAGCTTGGATTTCGTTCCTTCCACGTTAGACTCTGATTCCACCGTCTTCTCTTCTCCTGTTTCGGAGCTGAAAAAGAGTAACAAACGCGATTATTTCAGTAATTCATTAGAGTCTAGGTTAGTTGCGTCCAGAAAAAATGCTTTTGATTTGGAGGTGAATTTGTGCGATGAGTTTGGTAGTTCTGTCGATTGTCCTCTATGCGGTGTTGATATATCTAATTTAACTGAGGAACAGCGAAATCTTCATACTAATGATTGTCTTGATAAATCTGGAGAAGATGTTGCGCCTCCAAATGATGATGTGGGAGCTCAATTTGGGCCGAAAAACTCCCCTGTCGTCGAATGGATACGTGGTCTTGGGTTAGCTAAGTACGAAGAAGTTTTTGTTAGGGAAGAAGTTGATTGGGATACCTTGCAATGGCTGACAGAAGAGGATCTCTTAAACATGGGTATAACTGCACTTGGTCCCAGAAAAAAGATTGTACATGCTCTTTCAGAACTTAGAAGAGGAATCACCTTAGGAACCACCTCTTCAAGTTCAAGCGAGAAACATGAGGATGCCGAGGTTGAGCCTAGAAGGACTAGAAACCAGAAAAGCAAAATGCAACACGACAAATCTGAGCGAAAAGTTGATGGAACTGTCAAGCCAGTAGCAAACAAATTAATTACTGAATATTTTCCGGGATTTGCTACCAGTGGGAAGAAAGTTTCTGCCCCTCCTGTAGAACGAAATGAAACGAACACCAGTGGCTCGTCTGATCGAAAGCGCAAAGCAAAAAATATTTCAACAAGTACAAAGATTCGCGACATTCCTAAATGGTGTGCCATACAAGGAACACCTTTCCGAGTGGATGCTTTCAAATACCTAAGAGGAGATTGTTCCCACTGGTTTCTCACACACTTCCACATGGACCATTATCAAGGTCTCACCAAGTCATTCAATCATGGAAAGATCTATTGCTCCTCTGTTACAGCCAGACTAGTAAATATGAACATAGGAATTCCATATGATAAACTACATATTTTGCCTCTAAACCAAAAGGTTGAAATAGCTGGTATTGGTGTGACTTGTTTGGATGCCAACCATTGTCCAGGTTCCATAATTATACTCTTTGAACCTCCAAATGGTAAGGCAGTACTTCATACGGGTGATTTTCGTTACAGTGAAGAAATGGCAAACAATCCTTTACTGCAGACCTGTCCTATTCACACTTTAATTCTTGACACCACATACTGCAACCCACAGTATGACTTTCCAAAACAAGAGGCTGTAATACAATTTGTTATTGATGCCATTCAAGCAGAAGCTTTTAATCCCCGGACTCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGACTATTCTTGGAGGTTGCTCGTTCGCTTCACCAAAAAGTGTATGTGACAGCAGCAAAGTTACGCCTTTTAAAATGTTTGGAGTTTACAGAGGAGGATATGCAGTGGTTTACTTCAAATGAGCATGAAAGCAATATTCATGTTGCCCCTATGTGGACACTTGCAAGCTTCAAAAGATTGAAGCACATATCAAGTCAATATGCGAGTCGGTTCAGCCTTATAGTTGCTTTCTCTCCTACTGGTTGGACATTTGGCAAAGGTAAAAAGAAGTCTCCCGGAAGAAGGTGGCAGCAGGGTACCATTATAAGGTATGAGGTTCCTTACAGTGAGCATTGCAGCTTTACAGAACTCAAAGAGTTTGTAAATTTTGTATCTCCCGATAACATTATACCAAGTGTGAATAATGATGGACCAGAATCTGCCGATGCAATGGTTTCTCTCATGTCAACCTGA | 2025 | 0.4114 | MADSDHTQFDNNDNDDFEVPLTQTQSPILKPLSQSNNQNQRPSKKPKTNKTTSFPGKENIPPFEGYDIGNSSLDFVPSTLDSDSTVFSSPVSELKKSNKRDYFSNSLESRLVASRKNAFDLEVNLCDEFGSSVDCPLCGVDISNLTEEQRNLHTNDCLDKSGEDVAPPNDDVGAQFGPKNSPVVEWIRGLGLAKYEEVFVREEVDWDTLQWLTEEDLLNMGITALGPRKKIVHALSELRRGITLGTTSSSSSEKHEDAEVEPRRTRNQKSKMQHDKSERKVDGTVKPVANKLITEYFPGFATSGKKVSAPPVERNETNTSGSSDRKRKAKNISTSTKIRDIPKWCAIQGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTKSFNHGKIYCSSVTARLVNMNIGIPYDKLHILPLNQKVEIAGIGVTCLDANHCPGSIIILFEPPNGKAVLHTGDFRYSEEMANNPLLQTCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLHQKVYVTAAKLRLLKCLEFTEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVNFVSPDNIIPSVNNDGPESADAMVSLMST* | 675 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr3g3826 | 674 | MobiDBLite | consensus disorder prediction | 14 | 56 | - | - | |
| Mtr3g3826 | 674 | Pfam | DNA repair metallo-beta-lactamase | 556 | 660 | IPR011084 | - | |
| Mtr3g3826 | 674 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 352 | 656 | IPR036866 | - | |
| Mtr3g3826 | 674 | Gene3D | - | 177 | 244 | IPR013761 | - | |
| Mtr3g3826 | 674 | SMART | SAM_4 | 175 | 241 | IPR001660 | GO:0005515 | |
| Mtr3g3826 | 674 | Gene3D | - | 488 | 635 | - | - | |
| Mtr3g3826 | 674 | ProSiteProfiles | SAM domain profile. | 178 | 241 | IPR001660 | GO:0005515 | |
| Mtr3g3826 | 674 | MobiDBLite | consensus disorder prediction | 319 | 333 | - | - | |
| Mtr3g3826 | 674 | Pfam | SAM domain (Sterile alpha motif) | 181 | 239 | IPR001660 | GO:0005515 | |
| Mtr3g3826 | 674 | SUPERFAMILY | SAM/Pointed domain | 181 | 240 | IPR013761 | - | |
| Mtr3g3826 | 674 | PANTHER | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED | 133 | 672 | - | - | |
| Mtr3g3826 | 674 | Gene3D | - | 347 | 657 | IPR036866 | - | |
| Mtr3g3826 | 674 | SMART | Lactamase_B_5a | 332 | 487 | IPR001279 | - | |
| Mtr3g3826 | 674 | MobiDBLite | consensus disorder prediction | 304 | 333 | - | - | |
| Mtr3g3826 | 674 | CDD | SAM_superfamily | 183 | 237 | - | - | |
| Mtr3g3826 | 674 | MobiDBLite | consensus disorder prediction | 243 | 283 | - | - | |
| Mtr3g3826 | 674 | CDD | SNM1A-1C-like_MBL-fold | 333 | 485 | - | - | |
| Mtr3g3826 | 674 | MobiDBLite | consensus disorder prediction | 252 | 283 | - | - | |
| Mtr3g3826 | 674 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
| Mtr3g3826 | 674 | PANTHER | DNA CROSS-LINK REPAIR 1A PROTEIN | 133 | 672 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr3g3826 | Mtr-Chr3 | 52089261 | 52096216 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr3g3826 | 180 | 235 | Glycosyltransferase | AT3G07170 | 46.429 | 4.26e-07 | 48.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr3g3826 | K15340 | - | gmx:100816321 | 958.362 |
Event-related genes