Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3825 ATGGCGGCGGCGGAGGAAGGGTGGTGTGTGGTCACCGGAGGACGAGGCTTTGCTGCTCGTCATTTAGTCGAAATGCTAATCCAATTGAACACCTACTGTGTCCGCATCGCCGATTTGGGATCCACCATTGAACTTGAACCCTCTGAGCAATTAGGTCTTCTCGGTCAAGCTTTACACTCCGGTCGTGCTCAATATGTCTCCGTCGATCTTCGCAACAAACCTCAACTCTTAAAAGCATTTGATGGAGTTGAGGTTGTTTTCCACATGGCTGCTCCAAATTCTTCTATAAACAACTACCAGCTTCATCATTCCGTCAATGTTGAAGGAACAAAGAATGTTATTGATGCTTGTGTTGAGTTAAAAGTGAAGAGACTCATTTACACTAGCTCTCCCAGTGTTGTTTTTGATGGAATTCATGGAATTCATAACGGAAGTGAATCGTTGCCTTATCCACCTTCGCATAATGATCATTACTCAGCAACTAAAGCTGAGGGTGAGGGATTGGTTATTAAGGCTAACGGGACTAGTGGACTCCTGACATGTTGCATACGCCCTAGCAGCATTTTTGGACCTGGTGATAAACTGTTGGTGCCTTCATTGGTTGATGCTGCAAAGGCAGGGAAATCCAAGTTCATTGTTGGTGATGGCAATAACGTATACGATTTCACATATGTTGAAAATGTGGCTCATGCCCACATATGTGCTGATCGAGCTCTAGCTTCAGAGGGAACCGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATCACGAATATGGAACCTATAAAGTTTTGGGAGTTCATGTCTCTAATTTTGGAAGGTCTTGGATATCAAAGGCCAAGCATAAAGATCCCTGTCTTTGTTATCATGCCAATTGCACATTTGGTGGAGTGGATATATAGGCTGCTTGGCCCATATGGAATGAAGGTGCCTCAGCTGACCCCTTCAAGAATAAGACTCACATCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGACCGCCTTGACTATGCACCCATCATACCTCTACAGGAGGGCATACGGAGGACAATCGAATCATATCCACATTTGAGGGCTGAAAATCAACTTAAGTCTAAAAGAGAAGGTCCCTCCAAAGCTTCTGTATATCTTGGAAGTGGAAGAGTTGCTGACACGTTGCTTTGGAAGGATAAAAAGCAAACTTTCACTACATTGTTAGTCTTCATAGCAATATATGTCAACTTCATTGCATCTGAGAATACCTTCATTACTGCTCTTACAAAGCTTCTATTATACTCATCGATCGGTTTATTCATTCATGGCATTCTTCCTGCAAAAATATTGGGGTACACTGTTGAGAAAATGCCCACATCATGGTTTCACTTATCAGAAGATATTTCGAATCAAATTGCTTTCTCAGTTGCCTCATCTTGGAATTTTGCTGTGAATGCATTAAAATCCCTTGCAGAAGGGAATAGTTGGGTGATGTTTTTCAAGGTTGTTTTCACTCTGCTCGTTCTTAGCTTCCTGGGAGCCTTTTCACTTAAGAACTTGTATACTATAGGACTCACCTTAGGATTTACAGCTTTCTACGTTTATGAAAAAAAGGAGGAAGACATTGACGGCATATTTTTAAAATCACATACTTTTGGATGCAAATTGATATCTGATCTTACCAAGAAGTTTGTTACTTCAAAGATTGATTGA 1689 0.4156 MAAAEEGWCVVTGGRGFAARHLVEMLIQLNTYCVRIADLGSTIELEPSEQLGLLGQALHSGRAQYVSVDLRNKPQLLKAFDGVEVVFHMAAPNSSINNYQLHHSVNVEGTKNVIDACVELKVKRLIYTSSPSVVFDGIHGIHNGSESLPYPPSHNDHYSATKAEGEGLVIKANGTSGLLTCCIRPSSIFGPGDKLLVPSLVDAAKAGKSKFIVGDGNNVYDFTYVENVAHAHICADRALASEGTVSEKAAGEAYFITNMEPIKFWEFMSLILEGLGYQRPSIKIPVFVIMPIAHLVEWIYRLLGPYGMKVPQLTPSRIRLTSCTRSFDCSKAKDRLDYAPIIPLQEGIRRTIESYPHLRAENQLKSKREGPSKASVYLGSGRVADTLLWKDKKQTFTTLLVFIAIYVNFIASENTFITALTKLLLYSSIGLFIHGILPAKILGYTVEKMPTSWFHLSEDISNQIAFSVASSWNFAVNALKSLAEGNSWVMFFKVVFTLLVLSFLGAFSLKNLYTIGLTLGFTAFYVYEKKEEDIDGIFLKSHTFGCKLISDLTKKFVTSKID* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3825 562 Gene3D - 2 359 - -
Mtr3g3825 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 355 IPR036291 -
Mtr3g3825 562 Pfam Reticulon 383 538 IPR003388 -
Mtr3g3825 562 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 361 - -
Mtr3g3825 562 ProSiteProfiles Reticulon domain profile. 383 556 IPR003388 -
Mtr3g3825 562 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 5 361 - -
Mtr3g3825 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 10 285 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3825 Mtr-Chr3 52072436 52078731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3825 10 372 Lipid Metabolism Gene Families AT2G33630 31.496 3.52e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3825 K23558 - gmx:100799363 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3825 3 52072436 52078731 Mtr3g3825 3 52072436 52078731 ECH