Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3803 ATGGGTGAGGCTCCAAAGCTACTATACATTAATGGGTTCCCAAAGTATGGCCATGATGAAACAGATCACCACCTTATAACCAATAATTACGACCATGATATTCCTTGGTACGAGGAAGTTATCGATGATGATCTCAAATGGTCTTTTGCTTTGAACAGTGTGCTTCATAAAGGGATCAGTGATTACCAAGAGATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCCCTAGTGATTGATGGAAAGATGCCGAGTGCTGAAATGGACGAATTCATTTATCATGAATGCTTGATTCATCCCCCTCTATTATGTCACCCCAACCCCAAAAGAGTGTTTATAATGGGAGGAGGTGAAGGGTCTGCTACTAGGGAGTCCCTCAAGCATAGCATAAGTAATAGAGAGAGAGTCATCATGTGTGATATAGACCAGGAGGTGGTAGATTTCTGCAAAAAATACTTGATTACTAACAGGGAGGCCTTTGCTCACAAGAAGCTCGACCTTGTCATCAATGATGACAAGGCTGAGTTAGAGAAAAGGAAAGAGAAATTTGATATCATTGTTGGAGATTTGGCAGACCCAGTTGAAGGTGGACCTTGTTATCAACTTTATACAAAATCGTTCTATGAAAATATTCTGAAACCCAAGCTCAATGAGAATGACATTTTTGTGACTCAGGCTGGACCGGCAGGTATCTTGACACACAGGGAAGTCTTCACTTCTATATACAACACAATCAAACAAGTCTTTAAATATGTGATAGTATACACAACTCATGTACCATCTTTTGCTGATACTTGGGGATGGGTTATGGCTTCAGACCAACCATTATTCATTGGTTCTGAGGAAATGGACAAAAGAATCAAAGAAAGAATAAATGGAGAATTGCTCTATCTAACTGGTGACTGGTTCCACTCATCTACCACCATGAACAAGACTCTTTCGCAATCGCTTCAGAATGAAACTCATGTGTACACTGAAGAAAATGCTAGATTCATTCCTGGACACGGTGTGGCTTATCGTCTCTGA 1026 0.4045 MGEAPKLLYINGFPKYGHDETDHHLITNNYDHDIPWYEEVIDDDLKWSFALNSVLHKGISDYQEIALLDTKRFGKALVIDGKMPSAEMDEFIYHECLIHPPLLCHPNPKRVFIMGGGEGSATRESLKHSISNRERVIMCDIDQEVVDFCKKYLITNREAFAHKKLDLVINDDKAELEKRKEKFDIIVGDLADPVEGGPCYQLYTKSFYENILKPKLNENDIFVTQAGPAGILTHREVFTSIYNTIKQVFKYVIVYTTHVPSFADTWGWVMASDQPLFIGSEEMDKRIKERINGELLYLTGDWFHSSTTMNKTLSQSLQNETHVYTEENARFIPGHGVAYRL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3803 341 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 34 273 IPR030374 -
Mtr3g3803 341 PANTHER BNAA02G04280D PROTEIN 1 340 - -
Mtr3g3803 341 Pfam Spermine/spermidine synthase domain 90 270 - -
Mtr3g3803 341 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 340 - -
Mtr3g3803 341 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 317 IPR029063 -
Mtr3g3803 341 Pfam Spermidine synthase tetramerisation domain 36 83 IPR035246 -
Mtr3g3803 341 Gene3D Vaccinia Virus protein VP39 86 340 IPR029063 -
Mtr3g3803 341 Gene3D Spermidine synthase, tetramerisation domain 35 85 IPR037163 -
Mtr3g3803 341 CDD AdoMet_MTases 110 191 - -
Mtr3g3803 341 Hamap Polyamine aminopropyltransferase [speE]. 35 318 IPR001045 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3803 Mtr-Chr3 51840939 51845040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3803 K18787 - gmx:100784972 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3803 3 51840939 51845040 Mtr3g3803 3 51840939 51845040 ECH