Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3802 ATGGCATCTACTTCTGTTGCAACAGCTTTGCCACTGGGTTCTGCTACCCAAAACAAGCTGAAAAATCCATCCTCCGAATCATTTTTCAGGCCATTACCCATAACACAACCAAAGAGGATCACACAGTCAAAATCCAAGGTTGAAATTAATGCATCTTTGAAAGAAAAGGCAGTGACAGCAATTACAGCTGCATCCTTGACAGCCTCCATGGTTATACCTGATGTGGCTCATGCAGCTGGATCTGATCTCTCACCATCTCTCCAGAACTTTTTGCTAAGCATTTTTGCTGGTGGAGCTGTGCTAACAGCTATACTTGGAGCTGTTATTGGGGTTTCCAACTTTGATCCGGTTAAGAGAGCTTAA 363 0.4353 MASTSVATALPLGSATQNKLKNPSSESFFRPLPITQPKRITQSKSKVEINASLKEKAVTAITAASLTASMVIPDVAHAAGSDLSPSLQNFLLSIFAGGAVLTAILGAVIGVSNFDPVKRA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3802 120 PANTHER OS07G0673550 PROTEIN 2 120 - -
Mtr3g3802 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Mtr3g3802 120 Gene3D Single helix bin 83 120 - -
Mtr3g3802 120 PANTHER OS07G0673550 PROTEIN 2 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3802 Mtr-Chr3 51839843 51840439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3802 - - aprc:113864756 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3802 3 51839843 51840439 Mtr3g3802 3 51839843 51840439 ECH