Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3792 ATGGATTTCAGGTTGATGGGTTTGGATTCACCACTCTTCAACACCATCCACCACATAATGGACCTCACAGACGACACAACAGAGAAGAATCTAAACGCACCAACACGAACCTACGTTCGCGACGCAAAAGCAATGGCTGCAACACCAGCAGACGTGAAAGAGTATCCAAACTCATACGTGTTCGTGGTGGACATGCCAGGGTTGAAATCTGGTGACATCAAGGTTCAGGTTGAAGATGAGAATGTGCTTCTGATAAGCGGTGAAAGGAAGAGAGAAGAAGAGAAAGAAGGTGGTAAATATTTGAAGATGGAAAGAAGGGTTGGTAAGTTTATGAGGAAATTTGTGTTACCAGAGAATGCTGATGTTGAAGGTGGTGTTTCTGCTGTTTGTCAAGATGGTGTTCTTACTGTTACTGTTAATAAGTTGCCTCCTCCTGAACCTAAGAAGCCTAAAACTATTCAGGTTAAGGTTGCTTGA 477 0.4319 MDFRLMGLDSPLFNTIHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDENVLLISGERKREEEKEGGKYLKMERRVGKFMRKFVLPENADVEGGVSAVCQDGVLTVTVNKLPPPEPKKPKTIQVKVA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3792 158 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 8 157 - -
Mtr3g3792 158 Pfam Hsp20/alpha crystallin family 51 156 IPR002068 -
Mtr3g3792 158 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 8 157 - -
Mtr3g3792 158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 158 IPR002068 -
Mtr3g3792 158 Gene3D - 8 157 IPR008978 -
Mtr3g3792 158 SUPERFAMILY HSP20-like chaperones 28 150 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3792 Mtr-Chr3 51755947 51756702 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3792 K13993 - jre:108984742 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3792 3 51755947 51756702 Mtr3g3792 3 51755947 51756702 ECH