Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3773 ATGGCTTGGAGGCATTTGATTACAAAGGTTGAAAGCCGTCAATTAGAATTCGGAAAGGTCAAAGATTTATTGAGTGGAAACCATTTCTCACCTAATAAGTTTCAAGGCTTTAAAAGGCATAGGCTTTTCTTCTCCCAGGGGAGATCCCAGTCCAGCTATCTAGAAAATTTGTCCCAACGACCACGTGATTCATCTGAAGCTGCGGCAGTCTCTTATCTCAAAGAACTTTACCTTCGAAATGATCCTGAAGCCGTGATTAGGGAATTTGAGAGTCATCCATCCCTGCATACAAATTCATCGGCACTTTCTCAATATGTTAAAGCATTAGTAAAAGTTGATATGCTGGATGAAAGTGAATTACTAGAGACTTTGCAAAGAGGTATTTCTAATTCAGCGAGAAAGGAAGAAAATATTATAGGTGGCCTCACTTCTCTGAGAAGTGCAGGAAAACCTACAAAAGATGGAATTCTTGGAACTGAAAAAACTCCTATTCATATGGTCGCTGCATCATGTGGAAATTTCAAAGAGCAGCTATGGCGAACAATTAGGACTCTTGCAGTGGGATTCATCTTGATTTCTGGTGTCGGAGCTCTTATTGAGGATAAAGGAATTAGTAAAGGACTTGGTATGAATGAAGAAGTGCGGCCCGTTTTGGAGACAAATACTAAACTTAGCGATGTGAAAGGTGTGGATGAGGCAAAAGCTGATCTTGAAGAAATTGTTCATTACCTAAGAGATCCTAAGCGCTTTACTCGTCTTGGTGGCAAACTCCCAAAAGGTGTTTTGCTTGTTGGCCCGCCTGGCACTGGTAAAACAATGCTGGCAAGAGCTATTGCTGGAGAGGCTGGGGTTCCTTTCTTCTCATGCAGTGGAAGTGAATTTGAAGAGATGTTTGTTGGTGTTGGTGCACGAAGGGTGCGAGATCTTTTTGCTGCTGCAAAAAAGCGGTCTCCTTGTATAATCTTTATTGATGAGATTGATGCTATTGGTGGAAAACGAAACGCAAAAGACCAAATGTACATGAAGATGACTTTAAATCAAATGCTTGTTGAGTTAGATGGATTCAAACAAAATGAAGGCATAATTGTGCTTGCTGCTACTAACTTACCTCAATCACTAGATAAGGCTTTGGTGAGACCTGGGCGATTTGATCGCCATGTTGTTGTTCCCAATCCAGATGTAGAAGGACGGCGACAAATTTTGGAATCTCACATGTCCAAGGTTCTGAAGGCGGATGATGTTGATCCGATGATCATTGCTCGGGGTACACCTGGTTTCTCCGGTGCTGACCTTGCAAACTTGGTTAATGTTGCTGCCCTGAAGGCTGCAATGGATGGTGCCAAAGCCATGAACATGCATGATTTAGAGTTTGCACGAGACAAGATTATGATGGGAAGTGAACGCAAGTCGGCTGTTATATCTGAGGAGTCAAGAAAGATTACTGCTTTCCATGAGGGTGGCCACGCCTTAGTGGCAATTCATACTGATGGTGCATTTCCTGTTCACAAGGCAACTATTGTTCCTCGTGGGACGGCTCTTGGCATGGTTTCTCAATTGCCTGACAAGGATCAGAACACTCATTCCCGTAAACAGATGCTTGCCGAGCTTGATGTATGCATGGGAGGTCGGGTTGCTGAAGAGTTAATTTTTGGAGAAAGTGAAGTTACTTCAGGTGCATACTCAGATCTTTCAAATGCTACTTCTTTGGCCAGGGAAATGGTTGCTGAATATGGTATGAGTACTGAAGTTGGACCCGTCACTCACAATTACTACGATGATGGGAGAAGTATGAGCTCAGAAACTAGACTGCTTATTGAGAAAGAAGTGAAGAACTTGCTTGAGAGAGCTTACAACAATGCAAAATTTATTCTAACCACCCATGACAAGGAGCTTCATGCACTTGCAAATGCTCTTCTGGAGCATGAGACACTTACAGGAAGTCAGATAAAGGAATTACTTGCAAAGGTCAAATCCCAGCAGCAACAGCCGCAATCATGTGTAGTCGAAACTCAGGGAAGTTCACGCTCAAACCCTGCATCTTCTGCGGCTGCAGTGGCCGCTGCAGCTGCCGCTTCTGCTGCTACAAAGGCTCAAGGAGTTTCCCCAGTAGGATCTTAG 2118 0.4348 MAWRHLITKVESRQLEFGKVKDLLSGNHFSPNKFQGFKRHRLFFSQGRSQSSYLENLSQRPRDSSEAAAVSYLKELYLRNDPEAVIREFESHPSLHTNSSALSQYVKALVKVDMLDESELLETLQRGISNSARKEENIIGGLTSLRSAGKPTKDGILGTEKTPIHMVAASCGNFKEQLWRTIRTLAVGFILISGVGALIEDKGISKGLGMNEEVRPVLETNTKLSDVKGVDEAKADLEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFIDEIDAIGGKRNAKDQMYMKMTLNQMLVELDGFKQNEGIIVLAATNLPQSLDKALVRPGRFDRHVVVPNPDVEGRRQILESHMSKVLKADDVDPMIIARGTPGFSGADLANLVNVAALKAAMDGAKAMNMHDLEFARDKIMMGSERKSAVISEESRKITAFHEGGHALVAIHTDGAFPVHKATIVPRGTALGMVSQLPDKDQNTHSRKQMLAELDVCMGGRVAEELIFGESEVTSGAYSDLSNATSLAREMVAEYGMSTEVGPVTHNYYDDGRSMSSETRLLIEKEVKNLLERAYNNAKFILTTHDKELHALANALLEHETLTGSQIKELLAKVKSQQQQPQSCVVETQGSSRSNPASSAAAVAAAAAASAATKAQGVSPVGS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3773 705 Gene3D - 210 391 IPR027417 -
Mtr3g3773 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 485 IPR027417 -
Mtr3g3773 705 PANTHER METALLOPROTEASE M41 FTSH 9 686 - -
Mtr3g3773 705 Pfam ATPase family associated with various cellular activities (AAA) 261 390 IPR003959 GO:0005524|GO:0016887
Mtr3g3773 705 SUPERFAMILY FtsH protease domain-like 472 658 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr3g3773 705 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 219 653 IPR005936 GO:0004176|GO:0004222|GO:0016020
Mtr3g3773 705 Gene3D - 392 465 - -
Mtr3g3773 705 MobiDBLite consensus disorder prediction 660 681 - -
Mtr3g3773 705 SMART AAA_5 257 393 IPR003593 -
Mtr3g3773 705 CDD AAA 258 390 - -
Mtr3g3773 705 Pfam AAA+ lid domain 413 456 IPR041569 -
Mtr3g3773 705 ProSitePatterns AAA-protein family signature. 361 379 IPR003960 GO:0005524|GO:0016887
Mtr3g3773 705 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 9 686 - -
Mtr3g3773 705 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 659 IPR005936 GO:0004176|GO:0004222|GO:0016020
Mtr3g3773 705 Pfam Peptidase family M41 472 652 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr3g3773 705 Gene3D Peptidase M41 466 664 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3773 Mtr-Chr3 51583623 51589375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3773 61 653 Miscellaneous Gene Families AT5G53170 52.335 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3773 K08955 - cit:102621961 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3773 3 51583623 51589375 Mtr3g3773 3 51583623 51589375 ECH