Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3767 ATGGCGGCATTTCTAACTCGAACATCTTCACGCTTCTCACAATTGTCATCACCACAACGCATAGCGTCTCTTCACACAACCCTCCCATCTCTCTCATCAACCACACCCACCCCTTATGCTCCACCGCCTCCTCCATCGACTACCTCTCCCGTCGGAATATCGAAGACGGCGGAGTACGTGATCTCGAAGGTTGATAATCTCATGAATTGGGCTCGTACTGGCTCAATCTGGCCTATGACTTTCGGACTCGCGTGTTGTGCTGTTGAAATGATGCATACTGGTGCTGCTCGTTACGATCTGGATCGATTTGGTATCATTTTTCGACCTAGTCCTCGTCAATCTGATTGTATGATTGTTGCTGGTACTCTTACCAATAAGATGGCTCCTGCTCTTCGCAAGGTGTATGACCAAATGCCTGAGCCTAGATGGGTTGTCTCCATGGGAAGTTGTGCTAATGGAGGAGGATACTACCACTACTCTTACTCTGTTGTCCGAGGATGTGACAGAATTGTTCCTGTTGATATTTATGTTCCCGGCTGCCCTCCAACTGCTGAGGCTTTACTGTATGGACTCCTCCAACTGCAGAAGAAGATCAATAGGCGCAAGGACTTCCTCCATTGGTGGACTCAGTGA 633 0.4866 MAAFLTRTSSRFSQLSSPQRIASLHTTLPSLSSTTPTPYAPPPPPSTTSPVGISKTAEYVISKVDNLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTQ* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3767 210 MobiDBLite consensus disorder prediction 35 49 - -
Mtr3g3767 210 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 85 194 IPR006137 GO:0051536
Mtr3g3767 210 PANTHER NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL 3 210 - -
Mtr3g3767 210 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 166 182 IPR006138 GO:0008137|GO:0048038|GO:0051539
Mtr3g3767 210 PANTHER NADH DEHYDROGENASE 3 210 - -
Mtr3g3767 210 MobiDBLite consensus disorder prediction 28 52 - -
Mtr3g3767 210 SUPERFAMILY HydA/Nqo6-like 58 202 - -
Mtr3g3767 210 TIGRFAM nuoB_fam: NADH-quinone oxidoreductase, B subunit 60 200 IPR006138 GO:0008137|GO:0048038|GO:0051539
Mtr3g3767 210 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 51 199 IPR006138 GO:0008137|GO:0048038|GO:0051539
Mtr3g3767 210 Gene3D - 56 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3767 Mtr-Chr3 51498663 51502596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3767 K03940 - gmx:100802267 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3767 3 51498663 51502596 Mtr3g3767 3 51498663 51502596 ECH