Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3748 ATGATTCGAAGAACAGTGAACTTTCCGAGTTTAAGGAAATTGCTTCTTCGTCCTAGTTATCTGTCTTCGTCCAAGATAGGGGCTTACAATGGCTATGCATCTCAGCCCTCCCCTCTTCCAATTCCAGACCCAACTTACAGCGATGATGATGAGTACGCAAATGTGGATTGGGACAGCCTTGGGTTTGGACTCATGCCAACCGATTTCATGTACGTTACAAAATGTAGTGCTGGCCAAAATTTTGGACATGGACAACTTAATCGGTATGGCAACATAGAACTTAGCCCATCAGCAGGGGTCCTAAATTATGGCCAGGGATTATTCGAAGGCACGAAAGCATACAGAAAGGAAAATGGGCAGCTGCTGCTATTCCGTCCAGAAGAAAATGCTATTCGCATGAAGATTGGTGCTGAAAGAATGTGCATGACAGCACCTTCCATTGATCAATTTGTTGATGCCTTGAAGCAAACTGCTCTAGCAAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCGTTGTATCTTAGGCCACTGCTCTTAGGAAGTGGTCCGGTTCTTGGTTTGGCTCCAGCACCTGAATACACATTCCTCATATATGCTTCCCCTGTTCGCAACTATTTCAAGGAAGGTTCTGCGCCACTTAATTTGTACGTGGAAGAGGATTTTGACCGTGCTTCGCAACGCGGGACTGGAAGCGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAAATAGAGCCAAGAGCAGAGGATTTTCGGATGTGTTATACCTTGATTCAAACAGTAAGAAAAATCTGGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAAACCATTTCAACGCCTGCTATCAGTGGAACCATACTTTCCGGAATCACAAGAAAAAGTGTCATTGAAATTGGCAGTGATTTGGGTTATCAGGTGGAAGAGCGCGTTGTTGCTGTGGATGAATTGACTGAGGCAGATGAAGTTTTCTGTACAGGAACTGCCGTTGGTGTTGCTCCTGTAGGGAGCATCACATACCAGAATAAAAGGGTGGACTATAAAACAGGTTCTGGAACAATTTGTCAAGAGCTGTGCAAGACCATTTTAGGAATACAAACAGGTAGTATTGAAGATAAGAAGGGATGGATTGTTGAATTTGATTAA 1164 0.4399 MIRRTVNFPSLRKLLLRPSYLSSSKIGAYNGYASQPSPLPIPDPTYSDDDEYANVDWDSLGFGLMPTDFMYVTKCSAGQNFGHGQLNRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGQLLLFRPEENAIRMKIGAERMCMTAPSIDQFVDALKQTALANKRWVPPPGKGSLYLRPLLLGSGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEEDFDRASQRGTGSVKTISNYAPVLMAQNRAKSRGFSDVLYLDSNSKKNLEEVSSCNIFIAKGKTISTPAISGTILSGITRKSVIEIGSDLGYQVEERVVAVDELTEADEVFCTGTAVGVAPVGSITYQNKRVDYKTGSGTICQELCKTILGIQTGSIEDKKGWIVEFD* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3748 387 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 83 385 IPR005786 GO:0004084|GO:0009081
Mtr3g3748 387 CDD BCAT_beta_family 93 374 IPR033939 GO:0004084|GO:0009081
Mtr3g3748 387 ProSitePatterns Aminotransferases class-IV signature. 270 299 IPR018300 GO:0003824
Mtr3g3748 387 PANTHER AMINO ACID AMINOTRANSFERASE 21 386 IPR005786 GO:0004084|GO:0009081
Mtr3g3748 387 Pfam Amino-transferase class IV 106 344 IPR001544 GO:0003824
Mtr3g3748 387 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 21 386 - -
Mtr3g3748 387 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 45 383 IPR036038 GO:0003824
Mtr3g3748 387 PIRSF BCAT1 42 387 IPR005786 GO:0004084|GO:0009081
Mtr3g3748 387 Gene3D - 215 386 IPR043132 -
Mtr3g3748 387 Gene3D - 33 214 IPR043131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3748 Mtr-Chr3 51303627 51312717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3748 K00826 - gmx:100782644 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3748 3 51303627 51312717 Mtr3g3748 3 51303627 51312717 ECH