Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3740 ATGGCACCTTTGTTCAATTGGGGTGTGAAAGAAAGTCACAAAGGAACACCAGTGGTTGTTAAAATGGAGAATCCAAATTGGGACATTGATGAACTTGAAGGTCCTTCAGAAGAAGATTTACTTTTAACAACAAAATCTTCTTCAAGAGACAAAGGAAAAGGCAAAAACGCTAAACAACTCACATGGGTTCTTCTCCTTAAAGCTCATAGAGCTGCTGGTTGCTTAGCTCAAATTGCTCCTGCATTGTTTGGTTTAGTTTCCGCCGTCAAACGCCGCGTTGCTTCTGGTAGAACCGACGCGGATATCGACGGTGGTGGTAGGGAAAAAGAGAACCCTACAGTGAAAAGTAGGTTCTATACATTCATCAAGGTGTTTCTATGTTTGTCGGTGTTTTTGTTGTGTTTTGAGGTTGTTGCTTATTTTAAAGGTTGGCATTTTAGTGCTCCACATCTTGAATTGTGGGCACCGACATTTGGTGTTAGAGATGTTTTTGATTGGTTTTATGCTAGATGGGTTTTAATTCGTGTTGGGTATCTTGCTCCTCCTTTGCAATTTCTCACAAATGCTTGTATTGTGCTCTTTCTTATTCAGAGTATAGATAGATTGGTTCTTTGTTTAGGTTGTTTTTGGATCAAGTTTAAGAAAATTAAACCTGTTCCAAAAGGTGGTGATGTTTCAGATCTTGAATCTGGTGATAAGGGTTTCTTCCCTATGGTTCTTGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCTATTGCAGCAGTGTGTAATTTGGATTGGCCAAAATCCAATTTTTTGATTCAAGTTCTGGATGATTCTGATGACCCAATTACACAATCATTGATTAAGGAGGAGGTTCATAAATGGCAAGAAGAAGGTGCCAACATTTTGTACCGACACCGTGTGATTAGAGATGGGTACAAAGCTGGTAATCTGAAATCAGCCATGAACTGTAGCTATGTGAAAGATTATGAATTTGTTACAATTTTCGATGCCGATTTTCAGCCTACTCCTGATTTTCTTAAGAAAACTGTTCCTCATTTTAAGGATAATGACGAATTAGGACTTGTGCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAACCTTTTAACAAGGTTGCAGAATATTAATCTGTGTTTCCATTTTGAAGTGGAACAACAAGTGAATAGTGTTTTCCTTAATTTCTTTGGGTTCAATGGTACTGCTGGAGTTTGGAGAATAAAGGCTTTGGAAGAAGCTGGTGGTTGGTTGGAGAGGACCACTGTGGAGGATATGGACATTGCTGTTCGAGCTCATCTTCATGGATGGAAATTCATTTTCCTAAATGATGTTGAGTGCCAATGTGAGTTACCTGAATCTTATGAAGCTTACAGAAAACAGCAGCATAGATGGCATTCTGGTCCAATGCAATTGTTTCGCCTTTGTTTGCCTGATGTCATAAAGGCCAAGATAAGCATATGGAAGAAGTTCAACATGATATTTCTCTTTTTCCTTCTCAGAAAGCTGGTGTTGCCATTTTACTCATTCACTCTATTCTGTATAATACTTCCCATGACAATGTTCGTACCGGAGGCCGAGATTCCCGCGTGGGTTGTTTGTTATATCCCAGCAGTCATGTCATTTCTCAACATTCTTCCAGCTCCAAAAGCTTTTCCTTTCATAGTACCGTATCTCCTATTTGAAAACACCATGTCAGTTACAAAATTCAATGCCATGATCTCGGGCCTATTCCAGCTAGGAAGTGCGTACGAATGGGTAGTCACTAAGAAGTCCGGTCGTTCATCGGAGGGTGATCTAGTTTCATTGATCGAGAAACCAAAGCATCAACGAGGGTCATCAGCACCTGATCTGGAAGAAATGAAAGAGGAAATCAGGAGACAAGAGGAAAATGTGTCTACGAAGAAGAAGAAGAAGAAACATAACAAAATGTATTTGAAGGAACTTGCTTTGGCTTTTTTACTTTTAACAGCTTCAGCAAGGAGTCTCCTTTCAGCTCAAGGGATTCACTTCTACTTCTTGCTATTCCAAGGAGTATCTTTCTTTTTGGTTGGTCTAGACTTAATTGGTGAACAAGTAGACTGA 2097 0.3963 MAPLFNWGVKESHKGTPVVVKMENPNWDIDELEGPSEEDLLLTTKSSSRDKGKGKNAKQLTWVLLLKAHRAAGCLAQIAPALFGLVSAVKRRVASGRTDADIDGGGREKENPTVKSRFYTFIKVFLCLSVFLLCFEVVAYFKGWHFSAPHLELWAPTFGVRDVFDWFYARWVLIRVGYLAPPLQFLTNACIVLFLIQSIDRLVLCLGCFWIKFKKIKPVPKGGDVSDLESGDKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSNFLIQVLDDSDDPITQSLIKEEVHKWQEEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVTIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIKAKISIWKKFNMIFLFFLLRKLVLPFYSFTLFCIILPMTMFVPEAEIPAWVVCYIPAVMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKPKHQRGSSAPDLEEMKEEIRRQEENVSTKKKKKKHNKMYLKELALAFLLLTASARSLLSAQGIHFYFLLFQGVSFFLVGLDLIGEQVD* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3740 698 Coils Coil 622 642 - -
Mtr3g3740 698 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 454 IPR029044 -
Mtr3g3740 698 Pfam Glycosyl transferase family group 2 331 526 IPR001173 -
Mtr3g3740 698 Coils Coil 690 698 - -
Mtr3g3740 698 SUPERFAMILY Nucleotide-diphospho-sugar transferases 239 515 IPR029044 -
Mtr3g3740 698 MobiDBLite consensus disorder prediction 614 642 - -
Mtr3g3740 698 MobiDBLite consensus disorder prediction 614 636 - -
Mtr3g3740 698 PANTHER - 6 697 - -
Mtr3g3740 698 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3740 Mtr-Chr3 51228850 51232600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3740 1 698 Miscellaneous Gene Families AT4G07960 77.247 0.0 1067
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3740 - - gmx:100805969 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3740 3 51228850 51232600 Mtr3g3740 3 51228850 51232600 ECH