Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3730 ATGTCATCATGGTTTGCTCGTTCCCTTGCAAACTCTCTCCGACTCGATGATGATGATGATGGTGACATTCAAAACGACATCGTAACCGAATCTCCAACCACCTCACCTAGAAATAATGATTACCAACAACAACAAGATAATAATGCAATTGAATCAGAAGAAGAAAATGATGAAACATTGCAAGGTCGTGGTGTTAAAGAAGACCTCGACGAAATCAAACAAACCCTAACTCGTCAATTTTGGGGTATGGCTTCTTTTCTCGCTCCTCCTCCTTCTTCAACTATTTCTCAAGATGAACATGAACAACAACGGCAAGTTGATGACGATATAATTTCGAATCAAAATTCGGAAATGGAACAAGGTGTGTTCCGTCGGGATGATCCTGAACCGAATTCGAATACATTCGGATCCGATTCAGAAGGAGAACATGAAAGGGAATTTGATATACAGTGTGCGGTTGGAATTACGGAGGAGGTTTTGACTTTTGCAATGAATATTGCTATGCATCCTGAAACTTGGTTGGATTTTCCAATTGATGAGGAAGATGATAACGACGATTTTGAAATGTCTGAGGACCAACGAGATCATGCTATGGTCGTTGAGAGGCTTGCTCCCAGATTAGCTGCGCTAAGAATTGAATTGTGCCCTTGTCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCTGAGGTTTTGTCTACACCCCAGGTCATGGTAGCCAGATCAATGTGGATGCAGGAATTGCAGAAACAAACAAAGCCTGAATTTGAAATTTTCGGAAGAAGTGATCTCTACTCAAGAGACAATGCTCAGCATCATGATTCTACTCCCAGCTTATCCGATGACACCTATTCTGATGACATGCCTCATCGGACATACGGATATAGAACAACCTCTTTGTCTATGATGGCAGATAATGAGTCTGAAAAGTACACAATTGAAAGTTCTGGATCACATTTATCGGATAAGTCGGTTATTGAGGAAAATCCAAGTAATAAAACTGAAAACAAAGATCTAAAAAGTGGTCGAGCTTCTCAAATTATGATTCAGGACTATGATGATGACGATGATGATTGGCCAGACGATGATTCTGATTTAGGGGGATATAGTGGAACACCACTCCCTATTGTGAATGAAGAAGATATATCTTTCAGCGATCTCGAGGATGATGATTATGGCATTAAACATGTTAGTAGCAATTCAGATTCAAAGGTGGTGTGA 1257 0.3962 MSSWFARSLANSLRLDDDDDGDIQNDIVTESPTTSPRNNDYQQQQDNNAIESEEENDETLQGRGVKEDLDEIKQTLTRQFWGMASFLAPPPSSTISQDEHEQQRQVDDDIISNQNSEMEQGVFRRDDPEPNSNTFGSDSEGEHEREFDIQCAVGITEEVLTFAMNIAMHPETWLDFPIDEEDDNDDFEMSEDQRDHAMVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDSEVLSTPQVMVARSMWMQELQKQTKPEFEIFGRSDLYSRDNAQHHDSTPSLSDDTYSDDMPHRTYGYRTTSLSMMADNESEKYTIESSGSHLSDKSVIEENPSNKTENKDLKSGRASQIMIQDYDDDDDDWPDDDSDLGGYSGTPLPIVNEEDISFSDLEDDDYGIKHVSSNSDSKVV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3730 418 MobiDBLite consensus disorder prediction 119 144 - -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 338 352 - -
Mtr3g3730 418 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 417 - -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 320 337 - -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 26 49 - -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 12 68 - -
Mtr3g3730 418 Gene3D BSD domain 155 246 IPR035925 -
Mtr3g3730 418 SMART wurzfinal6 184 236 IPR005607 -
Mtr3g3730 418 Pfam BSD domain 183 240 IPR005607 -
Mtr3g3730 418 ProSiteProfiles BSD domain profile. 181 236 IPR005607 -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 279 303 - -
Mtr3g3730 418 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 417 - -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 85 105 - -
Mtr3g3730 418 SUPERFAMILY BSD domain-like 154 240 IPR035925 -
Mtr3g3730 418 MobiDBLite consensus disorder prediction 320 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3730 Mtr-Chr3 51103156 51107706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3730 151 236 EF-hand Containing Proteins AT1G69030 31.250 6.99e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3730 - - gmx:100794286 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3730 3 51103156 51107706 Mtr3g3730 3 51103156 51107706 ECH