Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3713 ATGTCGAATCGTTTCGACAATTACAACAACAATAAGGGTTTCAACAAAGTACAGAAGAAATTTGTCCCTAAAAATCCAACTCCAACCTTGTCAACTTCTCTCAGAGAAAAACAACAAACTAGTTCTGGTTCCGGTAGCAATATCAATAATTCGTCAGGTAGGGTTCAACCGGGGGGTGTGAATGGCAATTTCGTGTATTATTTGCCGCAAGATGAAGCTGTCGCTGCTGGTTTTGGTGCTGAAGATGGTGGATTGGATGCCCTTGAATCTCAGAAAGTTGTTGATCTTCTCAATTCTCAGTTGTCTTGTTTGCTCAAGTTGAAACCCAAAGATTTTTGGTCACAAGTGGCCAGTGATACATCCCTGCATGAGTTTCTCAACAGCTTTCTGCAATTTAGAAGCAGGTGGTATGATTTCCCTCACCGTGGGGCCAGAGGGATTGTTGCTGGTGTTATTTTTGGAGAGCATGATTTGAGCCGTCGTGTTTTCATGATGTTGTATCGAATGTCTTCCAATAGAGATCCTGGTGCTCGACCTGCTGATACACTCAGTTCAAAAGATCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGATTTGCCAAAGTTGTTTGATATATGTGCCATATACAGTCATGAAAATGAAGAATTGACAAGATTGCTGGTTAAAAATGCTTTGCATGCTCAGCCTTGGTTACATGATAATTTAGCTGCAGTAACATCTCATTTTATGGTCATTGTAAGCACAATGCACGAACGATGCAGTTCATCATTGGAGGTCTTATTTGCTTCTGAAAGTCTTGATGACCATAATGCTACTTTACTAAAAACTGATCTTCTGGAGGTGATGGACTTCATAAATGATGCAATTGTATCAATGGATGCTTTTGTTAGTGCATACGAACAAGCAGCTTTATTGTTCTCTTCCCCTGTTGAGATGAGATATGGGAATGAGGAGATGCTGAGCTTCCTTGCCAGGTTGCATGATTCGCTAATTCCGTCCATGCAAAAGGGGTTCCATATCATTTTTGCTGGCAAACAAGATGACACAGTCTCTAATATTGTGGTTAGTTTGAAGATGTTAAGAATGAGATTGGTAAAGTTTGGGTGGCAATTATTGCACTTTTGCTATTTAAGTGACGATGTGTTCCTAGATAGCATCCCTCTTCCAGCTGCCACAAAGATGTTTCCTGCCAATGTTGAAGACCCAGTCATCAGAGCAGATATTCTGGTTCAGACATTTAGAGAAATAAATTCAGTATCATTAAGTTTCCAGGAAATCCATAAGAAGGAAACATTTCTTCAAGGTGTTGAAAGGAATTTCAATATATCAAGCAGGATTGAGGGATTAAAGCATAATGGGTGGATATTCGTTGAGGATGAACAACTTAAATATATATCTGAGATTTTGAGTTCTTTGAAGGAGACTATTAACAGGGAGCCATATTCTGCAAAGATCTCTGTGCCGAACCAAACCATGCAGACAGATGAAGATGCTGCAGTTTTAGAGTCAAAAATCAGTCAAATTAGGGACCTATTCCCTGATTACGGTAAAGGGTTTTTATCTGCATGTCTCGAGGTCTATGACCACAATCCAGAAGAGGTCATTCAAAGAATTTTAGAAGGAACCCTTCATAATGATCTGAAGTGCTTGGATACTTCATTAGAGACGGTGCCACAGTTACAAGCCAAGTCCACTGCTGTTAGCGGGAAAGATAAAGGAAAAGGTGTACTAATTGATGTTAGCGGGAAAGATAAAGGAAAAGGTATACTAATTGATTCTACGTCGGTGTCCTCAAATACAAAAGTTTCTAATGGTAAGAACCTGACAGAAGGGTCATTGATGCCATCATCTGCTCCACTTGGAAAATTTGTGAGGAAATCTAGAGCCGACAGGCCTGATCCAAGTATTTTGGACAATAATGATGAGAAAGATGCATCAAGAATTTTGCAATATGAATATGATGATGAGTATGATGACTCTTTTGATGACTTGGGTCTAAGCGTAGCGGAATCTGGAGTAGAAGAAAGTGAAGTGATTGATGACGAAATGAATGAAAAATTGGGGAAATCAAGGGAAACAGGGACCGGAAACTCTGGCCAAAATGCCTCTAATACAAAATGGGGCTCTAGGCAAAAGCCACAGTACTATGTCAAAGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCAGTAGCAGTTGCAAATTCTAATGAAGCTTCTTTAGTTAATGAAGCTCAGAAAGAATTGATACATGGTCTTGGACGTGGGGGCAACCTTCCTCTTGGCGCAGTACAGAAGTTGGCAGATTCCTACAAGGGAGGAGGAGGTGGTAACCAATTCCATGTTTCTGGAACAGAAGGGAGAGGGAGTGGCGGTGGCAGGGGAAAGAGAGAAGGGGGGAGACATATTGAACATAATCAACATCAGGAAAAACAATCTGATGATGTTTCTGAAGTGGAGGGTAGAGATCAAGGTCCAAATAACAGAGGGAGAGGGAGAGGGAGAGGAAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGATTGAGTGGTTTTTAA 2589 0.409 MSNRFDNYNNNKGFNKVQKKFVPKNPTPTLSTSLREKQQTSSGSGSNINNSSGRVQPGGVNGNFVYYLPQDEAVAAGFGAEDGGLDALESQKVVDLLNSQLSCLLKLKPKDFWSQVASDTSLHEFLNSFLQFRSRWYDFPHRGARGIVAGVIFGEHDLSRRVFMMLYRMSSNRDPGARPADTLSSKDHEVLLQEKKLLDLPKLFDICAIYSHENEELTRLLVKNALHAQPWLHDNLAAVTSHFMVIVSTMHERCSSSLEVLFASESLDDHNATLLKTDLLEVMDFINDAIVSMDAFVSAYEQAALLFSSPVEMRYGNEEMLSFLARLHDSLIPSMQKGFHIIFAGKQDDTVSNIVVSLKMLRMRLVKFGWQLLHFCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILVQTFREINSVSLSFQEIHKKETFLQGVERNFNISSRIEGLKHNGWIFVEDEQLKYISEILSSLKETINREPYSAKISVPNQTMQTDEDAAVLESKISQIRDLFPDYGKGFLSACLEVYDHNPEEVIQRILEGTLHNDLKCLDTSLETVPQLQAKSTAVSGKDKGKGVLIDVSGKDKGKGILIDSTSVSSNTKVSNGKNLTEGSLMPSSAPLGKFVRKSRADRPDPSILDNNDEKDASRILQYEYDDEYDDSFDDLGLSVAESGVEESEVIDDEMNEKLGKSRETGTGNSGQNASNTKWGSRQKPQYYVKDGKNYSYKVAGAVAVANSNEASLVNEAQKELIHGLGRGGNLPLGAVQKLADSYKGGGGGNQFHVSGTEGRGSGGGRGKREGGRHIEHNQHQEKQSDDVSEVEGRDQGPNNRGRGRGRGRGGGRNNHYRKDQAMKKHFSGLSGF* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3713 862 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 9 861 - -
Mtr3g3713 862 SMART cue_7 501 543 IPR003892 GO:0043130
Mtr3g3713 862 Gene3D - 501 544 - -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 691 712 - -
Mtr3g3713 862 Pfam CUE domain 503 543 IPR003892 GO:0043130
Mtr3g3713 862 MobiDBLite consensus disorder prediction 792 831 - -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 598 615 - -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 625 644 - -
Mtr3g3713 862 SUPERFAMILY UBA-like 501 558 IPR009060 GO:0005515
Mtr3g3713 862 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 9 861 - -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 598 644 - -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 776 862 - -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 1 54 - -
Mtr3g3713 862 CDD CUE_ASCC2 503 542 IPR041800 -
Mtr3g3713 862 MobiDBLite consensus disorder prediction 673 713 - -
Mtr3g3713 862 ProSiteProfiles CUE domain profile. 501 544 IPR003892 GO:0043130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3713 K18667 - gmx:100778129 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3713 3 50913356 50921994 Mtr3g3713 3 50913356 50921994 ECH