Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3706 ATGCATAATCAAGAAGCCGCAGTCAATGAACAACCTAGTAGCCAAATCAATCGTAATAAACAGGTGCCAATTGGCTTGTTGCTCCCTATCATAATTCCCCAACTTGCCGAAGACAAAGCCATTGAACTTCAAACTTTAATGGAAAAATTGAAGAGAGATGAAATATCCAAAGATCAGTGTGTAAGGCTTTTGAAAGGGATTGTGGAGGATCAGATGATTAGGAAAGCATTAACAGAAGTGCAGCAACAGATAAAATCCAATACGGGTTCTTCTGGACAACAGCACCCTATAAGCATGCCAACTGTTACTTCAATTCCAGCACAATTTAATGATCCCCATGCAATAGTAAAACTGCATCCGAGAAGTATGAATGCTGCTGCGGACCATTCTCATAATAATTCTTCAGTAATCCAAGTGAAGACTGGGCCGACTTATTCAACTATGGACATTAGTACTAAAAAATCTCAGGAACATGATGTTCAAGCAGTGGAACCAACTCAATTACTGCCATCTAGTTCTAACACCATTTGTCAAGAAACTGAAAACACCCCAGTTCACACACAAGGCTTTTATAATCAGCAACAACAACATATACATTTTCCATCGCCATATGAAATCAGTGGTGGCAACTTTAATCCTTTTTTGGGGAAAATCACTGGTTCATTATCATCTCTAAGACCACAACCTCAACCTCTCAATTCACACAAAAGGAGAATTCCACATCAGAGCATTGGTCTCAATCACTTGGGTGTAGAACAGCAGAGTTTATTCAATGATCCTAAGAGAATGCGAGGTGGATCAGTATCGACTGTGGTAAACAATACAGCATCACAACAAACTTTAAATTCCTGGCAATCATCAGCAGAACCTAATGACCTTTCTACAGAGCAGCAACATAAGCATCATTTATCTAAATTGCATGGGTTGCCTTCTGTTAATTCTGGTCAAAATGAACAGGGTGGTGATGTCAATCAAGGCACCATAAAGGATCCTGCAGGGGAGGCGGAGGGTGAGTGGGAGCAGCAGGTTCCACCACCTGAGCAACAAGCTAACCAGCAAGAGCCAGCGGCACTGGAGGCCATGGGACAGGCCGCACTGCACCAGATATTGGATGTCTTCTGGGAGATTAGGACTGACTTCAGACGGCTAGAGAGCAGACTTGGTGCAGTAGAGGCCAGACTGAAAGACCTCGAAGAATATGTCATACAGAATCCAAGCGTGTCGGTTATGAGTCCACGGAGCAGACAGTTAGATTAG 1257 0.4272 MHNQEAAVNEQPSSQINRNKQVPIGLLLPIIIPQLAEDKAIELQTLMEKLKRDEISKDQCVRLLKGIVEDQMIRKALTEVQQQIKSNTGSSGQQHPISMPTVTSIPAQFNDPHAIVKLHPRSMNAAADHSHNNSSVIQVKTGPTYSTMDISTKKSQEHDVQAVEPTQLLPSSSNTICQETENTPVHTQGFYNQQQQHIHFPSPYEISGGNFNPFLGKITGSLSSLRPQPQPLNSHKRRIPHQSIGLNHLGVEQQSLFNDPKRMRGGSVSTVVNNTASQQTLNSWQSSAEPNDLSTEQQHKHHLSKLHGLPSVNSGQNEQGGDVNQGTIKDPAGEAEGEWEQQVPPPEQQANQQEPAALEAMGQAALHQILDVFWEIRTDFRRLESRLGAVEARLKDLEEYVIQNPSVSVMSPRSRQLD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3706 418 ProSiteProfiles RST domain profile. 15 86 IPR022003 -
Mtr3g3706 418 Pfam RCD1-SRO-TAF4 (RST) plant domain 18 82 IPR022003 -
Mtr3g3706 418 MobiDBLite consensus disorder prediction 309 324 - -
Mtr3g3706 418 PANTHER BNAA06G36870D PROTEIN 1 101 - -
Mtr3g3706 418 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 1 101 IPR045144 GO:0005669|GO:0006352
Mtr3g3706 418 MobiDBLite consensus disorder prediction 279 293 - -
Mtr3g3706 418 Coils Coil 380 400 - -
Mtr3g3706 418 MobiDBLite consensus disorder prediction 279 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3706 Mtr-Chr3 50862211 50863708 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3706 K03129 - mtr:MTR_3g102910 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3706 3 50862211 50863708 Mtr3g3706 3 50862211 50863708 ECH