Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3679 ATGAAAATGGTGAATTCAAAAACAAGCAGTGACGTTTCCGAAGATAGCAGTAGCTCTCAAACTGAAATCGAAAATCACATCTCTGTTTCTCCTTACGATGAAGGAGAGAAGGTTTTCGCTTACCACACTTCCTGTCTTTATGAAGCCAAGGTTAAGCAAATTGAATACAAACATAAACGATGGAGTTTCTTTCTTCATTATCTCGGTTGGAAGAAAACTTGGGATGAATGGGTTGGTATTGATCGATTGATGAAACATACTGAAGAAAATATGCGGATTAAACTTGCACTTGATGAGAAATATGGCAATGATAAGAATGCCAGAAAGCCTCGTGGATCGTCGAAAAGTTCTAACGTAGCGAGAAGCAGAAAACGAAAGAATGATTCTCTGGTTAAGGAAAAACTTGCGGTTCTTCCAGACAAACTTGTCAACATTCAGATTCCACTAACACTAAAGAAGCAATTAGTTGATGATTTTGAGTTTATTACTCATCTCGGCAAGCTTGTTAAACTTCCTCGTACTCCTAATGTGAACGACATATTCAAGACTTATTTTGATTACAGATTGAAGAAAAGTGGATCGATAGCTGATTCCGTTGAAGAAATTATGAAAGGATTGAGTTGTTACTTTGACAAAGCACTGCCAGTGATGCTCTTGTACAATAATGAGCGTCAGCAGTACCAAGAAGCTTGTCCAAATGATATTGTTCCTTCTGCTATTTACGGTGCTGAGCATTTGTTACGTCTCTTTGTCAAGTTGCCAGAGTTATTGTTCCATGCTAACATTGAAGGCGATACATTGATAGAACTCCAGGCACAAGTACTTGACTTTCTCAGGTTTTTGCGAAAAAATCAGAGAGCATTTTTCCTTTCTTCTTATCATGTCCAGGAAGATGTTGAGAACAGCAGTGACAAACAAGTTTGTATTCCACATAATATCACATAG 945 0.3778 MKMVNSKTSSDVSEDSSSSQTEIENHISVSPYDEGEKVFAYHTSCLYEAKVKQIEYKHKRWSFFLHYLGWKKTWDEWVGIDRLMKHTEENMRIKLALDEKYGNDKNARKPRGSSKSSNVARSRKRKNDSLVKEKLAVLPDKLVNIQIPLTLKKQLVDDFEFITHLGKLVKLPRTPNVNDIFKTYFDYRLKKSGSIADSVEEIMKGLSCYFDKALPVMLLYNNERQQYQEACPNDIVPSAIYGAEHLLRLFVKLPELLFHANIEGDTLIELQAQVLDFLRFLRKNQRAFFLSSYHVQEDVENSSDKQVCIPHNIT* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3679 314 SUPERFAMILY Chromo domain-like 29 163 IPR016197 -
Mtr3g3679 314 ProSiteProfiles MRG domain profile. 139 308 IPR026541 -
Mtr3g3679 314 Gene3D MRG domain 136 307 IPR038217 -
Mtr3g3679 314 MobiDBLite consensus disorder prediction 103 127 - -
Mtr3g3679 314 Pfam RNA binding activity-knot of a chromodomain 33 83 IPR025995 -
Mtr3g3679 314 MobiDBLite consensus disorder prediction 1 27 - -
Mtr3g3679 314 PIRSF EAF3_MRG15 26 306 IPR008676 GO:0005634|GO:0006325|GO:0006355
Mtr3g3679 314 Pfam MRG 132 293 IPR026541 -
Mtr3g3679 314 Gene3D - 15 114 - -
Mtr3g3679 314 PANTHER CHROMATIN-BINDING PROTEIN 2 307 - -
Mtr3g3679 314 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 2 307 IPR008676 GO:0005634|GO:0006325|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3679 Mtr-Chr3 50669216 50673629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3679 K11339 - gmx:100777259 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3679 3 50669216 50673629 Mtr3g3679 3 50669216 50673629 ECH