Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3621 ATGCCATCTGTTCACTCTAGTCCATGCTATCCAATGGAAAATCCAGCAATAGCATCACTCCTTCGCCATACAACAGGCGATCAAAAGCGCAACAAATTCTCCGCTGGTGGACTCTTAAAGATGTTCAAACTCTTCCCTATGTTAACATCTGGTTGCAAAATGGTAGCACTATTAGGAAGACCAAGAAAGCCTATGTTAAAAGACAGTGCCACAACAGGAACAATCTTTGGTTACAGAAAAGGAAGAGTAAGCATAGCAATACAAGAAGATACGCGACAAATGCCGATTTTTCTCATTGAGTTACCAATGCTAACAAGTGCTTTGAACAAAGAAATGTCGTCTGATATCGTTAGAATCGCGTTGGAAAGTGAGACGAAAACGAATAAGAAGAAGTTGTTGGAAGAGTTTGTTTGGGCTGTTTATTGTAATGGAAGAAAAGTTGGGTATTCAATTAGGAGGAAACAAATGGGTGATGAAGAACTTCAAGTTATGCAACATTTGAGAGGTGTGTCCATGGGAGCAGGGGTGTTACCAACCGCATCTGATCATAAGGAAAGTTCTGATGGTGACCAAATGACTTATATGAGAGGTAGATTTGAAAGAGTAATTGGTTCTAAGGATTCTGAAGCTTTTTATATGATTAATCCTGATAATAATATTAATAATGGTGCTCAAGGACCTGAGTTTAGTATCTTTTTTGTTAGAGCTCACTAG 714 0.3866 MPSVHSSPCYPMENPAIASLLRHTTGDQKRNKFSAGGLLKMFKLFPMLTSGCKMVALLGRPRKPMLKDSATTGTIFGYRKGRVSIAIQEDTRQMPIFLIELPMLTSALNKEMSSDIVRIALESETKTNKKKLLEEFVWAVYCNGRKVGYSIRRKQMGDEELQVMQHLRGVSMGAGVLPTASDHKESSDGDQMTYMRGRFERVIGSKDSEAFYMINPDNNINNGAQGPEFSIFFVRAH* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3621 237 PANTHER - 1 236 - -
Mtr3g3621 237 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 71 235 IPR006460 GO:0010274
Mtr3g3621 237 Pfam Protein of unknown function, DUF617 72 235 IPR006460 GO:0010274
Mtr3g3621 237 PANTHER PROTEIN MIZU-KUSSEI 1 1 236 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3621 Mtr-Chr3 50066119 50067234 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3621 - - mtr:MTR_3g101300 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3621 3 50066119 50067234 Mtr3g3621 3 50066119 50067234 ECH