Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3616 ATGGGTGCAGAATCACACCATCCCCAAACCTTAATCCACAAAATCTACGCTCCATTCTCCAACGAATTCCCCTTCGCAACTCCTCTTCCTTCTCTCAAAACAAACGAACTTGAACTCGTTCGAGGCGTTTTGCGAATGCTTCAAGGGTTTTCCTCTTCTTTATTCTCATGGAATCACAATGAAAACCGTTTTCGTATCAATAATGGAGTTTACGTCACACATTTATCCCTCAAAAGTCTTCATTCGCTTCTTAATCAATTTCTTCACGCTGCCACGTGTCTTCAAATCGTTGAGATTACGGTTAAGAAAGTTGAAACTTCCATGCCGAGACCTAATCCTACTTTGAATGCGTTTGTTGCTTCTGCTTCTTCGTGGCTTAAGCGGTTGAGGAATGTTGCGTTGAAGGAGGAAGTGTCTATGAATAATGCAGATGTTGTTTTCACTCCAACTTTGTTAGGATTCAAAAATTCTTTATCAAGTCTTTGCTCTGGTGCTGAGTTCCTATTGCAAATAGTTCATGAGGCCATCCCTGATGTATATTTTGAGTTTGGGGCATCTGTACCTGCAGCAGACTTGGCTGTTCATGTTCTTGACTATCTTCATAAGAAGCTTGAAGAAATGTGTCTTGTACAAGGTGGCGAGGAGGAAGCTTATCTCACGGTACTTTACATGTATGTGGAAAGCTTGTTGCCATATATTGAGGGTCTTGATTCCTGGCTTTTTGACGGAATACTTGATGATCCTTCTGATCAGATGTTCTTTTTCGCTAATAAAGAAGTCTCAGTTGCTGAGGCTGAGTTCTGGGAGAAGAGTTGTCTAATAAGAAAGCTACAGCATCGTAAGTCAGATACCGAGTTGTCTTCCACAATTTATGCCGGTGATTCTATTCCAGCATCAAATGAGAAGAAGGAAATGGGCATGAGGGATTCCATCTCTTTGTCTAGTACAATTAAAGGAAAAGACCAGAGCGTTAGAGACTGTCCAGCTTGTCCTTTGTTTATAAAGGATTTAGCTAAGTCAATTATTTCTGCTGGAAAATCTTTGCAGCTGATGCGCCATGCCCCGAGTTCCTTAGCAGCATGTAGCAAAGGAAGTAATTTTAAGTTTGGAAGTACCAAATCCTTAAACTATGGTTTGTCTCCTTCTCATAGAGTGGCTGGGCTAACACTGTCAGAAATTTTTTCTGTGTCACTAGCTGGACTTATTGGTCATGGTGACCATGTTTGTAAATACTTTTGCCAAGATGATTGGCATGAATCTGTGTCTGTTTCTTCCTTTGTATCTTATTTAAATTTAAATGCTGAAAAAAAGGACAATCAAAACTTAACCGCTCCACCTTACTCAGAGAAGATTTGGTACAAGTTCTTGATTGATACATTATCTCAAAAAAGATCAGCTGACTTGAAGCCAAAATATGAAGACATAAATAATGGCAATGGTGATTCAAGAGGGGATAAAGTTGTTGAAGACAAATTGTTTCTCTTGAGATCATGCTTACAAAATCCCGTTATTACCGTTTGTCGAAAAACAATCGGAAACAGCAGGGATTCCTTGAAAACATTGAATTTATCTCGAAAATTCTGCTTGCCTTCTTTAAATGACGAGGGTTTAAGAAAGGCTATATTTGGTGGAGAAAGTACATCATTTTCAGATAGTGAAGGAACAAACTATACTTTTGGTTTTCAGTATGATGAATCCAAATTCATTCACTCACAGGATAAGAGAAAGCTGTTAGAAACACTGTTTCCTTTTCCCACCATTTTGCCTGCAGTTCAGGATGATCTTCCTGTGTCGGAGCTCTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAAAAGTTCTTCACTGGATGCAAAATGTTGACCTAAGAACGACTCCACTACCTCTGGTTATTATGCAGTACTGTCTAACCGCCTACATTCAGAAACAGGTAGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAATGAATGGAGGTTGATGGAAGAGCTTGCAGTGCTGCGAGCAATATACTTGTTAGGCTCAGGCGATTTGCTACAACACTTTTCAACCGTCATTTTCGATAAATTGGATAAGGGTGAAACATGGGATGATGATTTTGAATTAAACACAATATTACAGATGGTCTTAGCACCCAGTCTATGTTTGGCCAACTTCATTAAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCTTTGGTAGTGTCAATAACCAAAAATATTGTTGAGAGTGATGGGGAAGCTAGCACATCTGGTTCTGTCTTGGGTACTCATAAAAGTCGTGTCAATAACTTGGGGATGAACGGTCTTGATATGCTAAAATTCACATATAAGGTACCTTGGCCTCTTGAACTCATTGCAAACACAGAAGCAATTAAGAAGTACAACCAGGTGATGCGGTTTTTGCTGAAGGTCAAGCGTGCAAAATTTGTGTTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGATCTACAACAAATAACAGAAAACATCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGACCGGGTATATCACAGTGCATGGCGTGAACTATGTGAAAGTATGACAGTGGCCAAATCTCTGGATGAGGTCATTGAAGCCCATGAGGCTTACATGTTGTCGATTCAGCGGCAGTGCTTTGTGGTTCCTGATAAACTGGGGGCTTTGATTGCCAGCCGCGTGAATATCATCCTTGGTTTAGCCTTAGATTTCTATACCATACAACAAACATTAAAAAGCGGCGGAGCTGTTTCTGCAATCAAGGCAAGGTGTGAGATGGAAGTTGACCGGATTGAGAAACAGTTTGATGATTGCATTGCTTTCTTACTTAGGGTCTTATCTTTCAAACTAAATGTAGGGCATTTCCCTCATTTGGCTGATTTGGTCACCAGAATTAACTACAACTATTTTTACATGTCTGCTAATGGGAATTTAATGACCACATCTGGCCCTGGAAGTGTTGCTTCAAGATTGGGGAAAGCCTCTGGGTAA 3048 0.4009 MGAESHHPQTLIHKIYAPFSNEFPFATPLPSLKTNELELVRGVLRMLQGFSSSLFSWNHNENRFRINNGVYVTHLSLKSLHSLLNQFLHAATCLQIVEITVKKVETSMPRPNPTLNAFVASASSWLKRLRNVALKEEVSMNNADVVFTPTLLGFKNSLSSLCSGAEFLLQIVHEAIPDVYFEFGASVPAADLAVHVLDYLHKKLEEMCLVQGGEEEAYLTVLYMYVESLLPYIEGLDSWLFDGILDDPSDQMFFFANKEVSVAEAEFWEKSCLIRKLQHRKSDTELSSTIYAGDSIPASNEKKEMGMRDSISLSSTIKGKDQSVRDCPACPLFIKDLAKSIISAGKSLQLMRHAPSSLAACSKGSNFKFGSTKSLNYGLSPSHRVAGLTLSEIFSVSLAGLIGHGDHVCKYFCQDDWHESVSVSSFVSYLNLNAEKKDNQNLTAPPYSEKIWYKFLIDTLSQKRSADLKPKYEDINNGNGDSRGDKVVEDKLFLLRSCLQNPVITVCRKTIGNSRDSLKTLNLSRKFCLPSLNDEGLRKAIFGGESTSFSDSEGTNYTFGFQYDESKFIHSQDKRKLLETLFPFPTILPAVQDDLPVSELLPFQRNSTLPSKVLHWMQNVDLRTTPLPLVIMQYCLTAYIQKQVDYIGVNMLLKLMNEWRLMEELAVLRAIYLLGSGDLLQHFSTVIFDKLDKGETWDDDFELNTILQMVLAPSLCLANFIKESIRNSADCMLLSAPDSLVVSITKNIVESDGEASTSGSVLGTHKSRVNNLGMNGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSTTNNRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCESMTVAKSLDEVIEAHEAYMLSIQRQCFVVPDKLGALIASRVNIILGLALDFYTIQQTLKSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTTSGPGSVASRLGKASG* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3616 1015 Pfam Gamma tubulin complex component N-terminal 40 397 IPR041470 -
Mtr3g3616 1015 Coils Coil 1012 1015 - -
Mtr3g3616 1015 Gene3D - 661 989 IPR042241 -
Mtr3g3616 1015 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 1010 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Mtr3g3616 1015 Pfam Gamma tubulin complex component C-terminal 661 990 IPR040457 GO:0043015
Mtr3g3616 1015 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 1010 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3616 30 708 Glycosyltransferase AT1G20570 48.138 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3616 K16572 - gmx:100782299 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3616 3 50020086 50026030 Mtr3g3616 3 50020086 50026030 ECH