Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3606 ATGGATCTTCGTGAATCAATAGCCAACCAAACCAACGTATCACTCAGCGTTGCAAAACATCTCTTCTCCAAAGAATCAGACAACAACATCGTGTTTTCTCCACTTTCACTCCAAGTTGTGCTAAGTATAATCGCTTCTGGTTCTGAGGGTCCCACTCAACAACAACTTTTCAACTTCCTTCAATCCAAATCCACCGATCATCTCAACTACTTCGCTTCACAGCTCGTTTCCGTCATCCTCTCCGACGCTTCTCCCGCCGGTGGTCCTCTCCTCTCTTTCGTCGACGGTGTTTGGGTTGATCAAACCCTTTCTCTTCAACCTTCCTTCCAACAAATCGTGTCCACTCATTTTAAAGCAGCTTTGTCTTCCGTTGATTTCCAGAACAAGGCTGTTGAAGTGACCAATGAAGTGAATTCATGGGCTGAAAAAGAGACAAATGGCCTTATTAAAGAACTTCTTCCTCTTGGGTCGGTCAACAATGCAACCCGGCTCATCTTTGCCAATGCACTATACTTCAAAGGAGCGTGGAATGATAAGTTTGATGCTTCAAAAACGGAAGACTACGAGTTTCACCTTTTGAATGGTAGCCCAGTCAAGGTTCCCTTCATGACCAGCAAGAAGAAGCAGTTTATTAGAGCTTTTGATGGTTTTAAAGTTCTCGGTCTTCCTTATAAGCAAGGCGAAGATAAGCGTCAATTCACCATGTACTTTTTTCTTCCAAATGCAAAAGATGGGTTGGCAGCTTTGGTCGAAAAGGTGGCTTCTGAATCTGAGCTACTGCAACACAAGCTTCCATTTGGTAAAGTGGAAGTAGGTGACTTTAGGATTCCAAAGTTCAATATTTCATTTGGACTTGAAACTTCTGATATGCTAAAGGAGCTAGGTGTGGTTTTACCTTTCTCTGGTGGAGGTCTGACAAAGATGGTGAACTCTTCAGTTAGTCAAAACCTTTGTGTTTCCAATATATTTCACAAGTCTTTCATTGAAGTAAATGAAGAAGGCACTGAAGCTGCTGCGGCAACTGCTGCAACTATATTGTTAAGGAGCGCCATGAGTATTCCACCTCGGCTAGACTTTGTAGCTGACCACCCTTTCTTATTTATGATTAGAGAAGACTTGACCGGAACAATCATCTTTGTTGGACAGGTGCTCAATCCTCTTGCTGGGTGA 1170 0.4299 MDLRESIANQTNVSLSVAKHLFSKESDNNIVFSPLSLQVVLSIIASGSEGPTQQQLFNFLQSKSTDHLNYFASQLVSVILSDASPAGGPLLSFVDGVWVDQTLSLQPSFQQIVSTHFKAALSSVDFQNKAVEVTNEVNSWAEKETNGLIKELLPLGSVNNATRLIFANALYFKGAWNDKFDASKTEDYEFHLLNGSPVKVPFMTSKKKQFIRAFDGFKVLGLPYKQGEDKRQFTMYFFLPNAKDGLAALVEKVASESELLQHKLPFGKVEVGDFRIPKFNISFGLETSDMLKELGVVLPFSGGGLTKMVNSSVSQNLCVSNIFHKSFIEVNEEGTEAAAATAATILLRSAMSIPPRLDFVADHPFLFMIREDLTGTIIFVGQVLNPLAG* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3606 389 CDD serpinP_plants 8 386 - -
Mtr3g3606 389 Gene3D Antithrombin, subunit I, domain 2 27 332 IPR042178 -
Mtr3g3606 389 SUPERFAMILY Serpins 6 386 IPR036186 -
Mtr3g3606 389 SMART serpin2 15 386 IPR023796 -
Mtr3g3606 389 Pfam Serpin (serine protease inhibitor) 9 386 IPR023796 -
Mtr3g3606 389 Gene3D - 176 381 IPR042185 -
Mtr3g3606 389 ProSitePatterns Serpins signature. 359 369 IPR023795 -
Mtr3g3606 389 PANTHER SERPIN-ZX-LIKE 13 389 - -
Mtr3g3606 389 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 13 389 IPR000215 GO:0004867|GO:0005615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3606 Mtr-Chr3 49930863 49933402 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3606 K13963 - gmx:100775287 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3606 3 49930863 49933402 Mtr3g3606 3 49930863 49933402 ECH