Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3597 ATGCGTTCGTTGATGGTACAATTATATGGAAGAAGAAGAAGCATGATATTGACATTGCCATTCATATCCCCATACAACATTACCAATTCACCTTCACTCATTCATAACCACAATTATTTCTCTACTAATCACAAACCTCCCTTTCTTCAATTCTTCTCCGGTATTCTTCTCAGGCCTACAATTGGATCATTTTCTACCACAATCACTTCTTCGTCTAAAACCATGTCTAATTTCGATTCCGACTCAGTCACTTACCTCAAACAACAAGAAGCTGTTGAGATTGATGAAACACTCATGGGTCCTCTTGGCTTCAGCGTCGACCAACTCATGGAATTGGCTGGTTTGAGCGTCGCTACTTCCATATATGAGGTTTACAAACCGGGCGAGTATAGTCGTGTTCTTACTATATGTGGTCCTGGTAACAATGGTGGTGATGGTCTGGTGGCTGCCCGTCACCTGCATCACTTTGGTTATAAGCCTTTGGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCATTGTCAATCCCTTTCTTGTCGGTGGAAGATCTACCATCAGATTTCTCCAAGGACTTTGACATTCTAGTAGATGCCATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCCTTTGATGATTTGATCCAAAGATTTATTTCTTTACGTAATAATCATAATCAAATTGGCCAAAAAAGACCGGTTATAGTCTCTGTGGATATTCCTTCTGGGTGGCATGTTGAAGAGGGAGATGTTAATGGCACAGGAATTAAATCTGATATGTTGATCTCTTTGACCGCACCAAAATTCTGTGCAAAGAAGTTTCGCGGCCCTCACCACTTTTTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAGTATAAGCTTATACTTCCACCATATCCTGGAACATCTATGTGTGTCCGAATTGGAAAGCCTCCTCAAATTGATATTTCAGCTCTACGAGAGAACTATATCTCTCCAGAATTTCTTGAAGACCAGGTGGAGGCAGACCCCATTAATCAGTTCCGTAAATGGTTTGATGATGCGCTGGCTGCGAGTTTGAAGGAACCAAATGCTATGGCCTTGTCAACTGTAGGAAAGGATGGAAAACCCTCATCACGGATCGTATTGCTAAAAGGCTTTGACAAGGATGGATTTGTGTGGTTCACAAACTATGAAAGTCAAAAGGGACGTGCGTTATCTGAAAATCCACATGCATCAATTCTTTTTTATTGGGATGGTTTAAACCGACAGGTACGTGTGGAGGGGTATGTTCAGAAAGTTTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGTCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTACTGTAGTGCCTGGTAGGCATGTTCTTCACGAGCAGTACAAAGAGCTGGAACAAAAATATGCTGATGGAAGTGTGATCCCTAAACCTAAAAACTGGGGAGGATACAGGCTAACACCAAATCTTTTTGAATTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCAATACGTTCCCCATGATATAGATGGAAAAAAGCAATGGAAGGTTGAGCGGTTGGCTCCCTGA 1626 0.4244 MRSLMVQLYGRRRSMILTLPFISPYNITNSPSLIHNHNYFSTNHKPPFLQFFSGILLRPTIGSFSTTITSSSKTMSNFDSDSVTYLKQQEAVEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPLVCYPKRTPKPLYAGLVTQLEALSIPFLSVEDLPSDFSKDFDILVDAMFGFSFHGSPRPPFDDLIQRFISLRNNHNQIGQKRPVIVSVDIPSGWHVEEGDVNGTGIKSDMLISLTAPKFCAKKFRGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEDQVEADPINQFRKWFDDALAASLKEPNAMALSTVGKDGKPSSRIVLLKGFDKDGFVWFTNYESQKGRALSENPHASILFYWDGLNRQVRVEGYVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVPGRHVLHEQYKELEQKYADGSVIPKPKNWGGYRLTPNLFEFWQGQKSRLHDRLQYVPHDIDGKKQWKVERLAP* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3597 541 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 334 541 IPR000659 GO:0004733|GO:0008615|GO:0010181
Mtr3g3597 541 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 497 541 IPR019576 -
Mtr3g3597 541 Pfam YjeF-related protein N-terminus 107 280 IPR004443 -
Mtr3g3597 541 PANTHER NAD(P)H-HYDRATE EPIMERASE 80 526 - -
Mtr3g3597 541 Gene3D - 82 325 IPR036652 -
Mtr3g3597 541 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 507 520 IPR019740 GO:0016638
Mtr3g3597 541 SUPERFAMILY FMN-binding split barrel 340 541 - -
Mtr3g3597 541 Hamap NAD(P)H-hydrate epimerase [nnrE]. 87 323 IPR004443 -
Mtr3g3597 541 Gene3D - 335 533 IPR012349 -
Mtr3g3597 541 ProSiteProfiles YjeF N-terminal domain profile. 91 308 IPR004443 -
Mtr3g3597 541 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 89 286 IPR004443 -
Mtr3g3597 541 SUPERFAMILY YjeF N-terminal domain-like 85 315 IPR036652 -
Mtr3g3597 541 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 324 541 IPR000659 GO:0004733|GO:0008615|GO:0010181
Mtr3g3597 541 Pfam Pyridoxamine 5'-phosphate oxidase 357 443 IPR011576 -
Mtr3g3597 541 PANTHER NAD(P)H-HYDRATE EPIMERASE 80 526 IPR032976 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3597 K23998 - gmx:100795497 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3597 3 49871041 49877619 Mtr3g3597 3 49871041 49877619 ECH