Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3591 ATGGATTCCTCTCCTTTTCTCGACGGAAACATACACAGAATTCTCGATTCTCGATACCTTCACTCTCGCCCTGATGTTAATCAGAGTTTGCAGACACACTCCTCTTTGATTCGAAGACTTTCTCAAGAAAAAGAGTTAGAGGGACATCTTGGTTGTGTCAATGCTATTGCTTGGAATTCAAAAGGTTCATTATTGGTATCCGGATCAGATGATACACGGATCAATGTTTGGAGCTATGCTGGTCAGAAACTAGTGCATTCAATTGACACCGGACATACTGCAAATATATTCTGTACTAAGTTCATACCAGAAACATCTGATGAGCTTGTAGCCTCTGGGGCGGGAGATGCTGAAGTTCGGTTATTCAATAGGTCTCGCGTAAGTGGCAATGGACTTAATGATAATCCCATTACTCCATCAGCACTTTACCAATGCCACACTCGTAGGGTCAAGAAATTGGCTGTTGAAAATGGAAATCCCAATGTGGTATGGAGTGCCAGTGAAGATGGAACCTTAAGACAACATGATTTTCGGGAAGGCACCTCTTGTCCTCCTGCAGGATCTCCACGCCAAGAGTGTCACAATGTTCTACTTGACTTACGGAATGGAGCTAAAAGATCCCTTGGTGATCCTCCTAAACAAGTCCTTGCTTTAAAATCTTTCGATATTAGTTCAACTAGACCTCATTTGCTCCTTGTTGGTGGGAGTGATGCCTTTGCACGTCTGTATGATAGAAGGATGCTACCACCTCTAAGCTCCTGTGGAAAAAGAATGCCTCCACCTCCTTGTGTTAATTATTTTTGTCCAATGCACCTTTCTGATCGTGGACATCCAAGTTTGCACTTAACTCATGTTACATTTAGTCCTGATGGATCTGAGGTTCTCCTGAGCTATAGCGGAGAGCATGTTTACTTGATGAATGTAAATCATGCTGGTGTGAATGAGGTGCAATATAGTTCAGGAGATGTTTCAAAGCTGATGACTTACTCTCCAAGCGTTAATGGGTTAGAATTACAGCCTTTTGTTTCCAATGTCTTCACAAATGGTTTTCACACTAAAAAGAACATCACTGCCAAGCTTGACAAGTGTAGGAAACTAATAAAATATGGTAAGAAGTCATTGGACGAGGGGGCACCCTATTATGGAATTGAGGCATGTAATGAAGTTTTGATTGGCTACAATCATATTATTGGACCTGCACTAAAACAGGAATGCTTGTGTACTCGTGCTGCACTATTGCTTAAGAGGAAGTGGAAAAACGATGCTCATATGGCTATAAGAGACTGCCATGCTGCTAGGAAATTTGATAAATCCGCATATAAACCACTTTACTACATGTCAGAAGCATTGTCTCAGTTGGGGAAACACAAAGAAGCTTTGGATTTTGCTGTTGCTTCCCACTCGCTGGCCCCATCCAAATCTGAAGTTGCTGAAAGAGTGGAGAATGCGAAGAAGGATATAGTTTTAGCTGAAACTGAGAAAAATAGTAAGACAAATAATGGAAGAGGTGGAAGAATGTTATCATTAAGTGACATTCTCTACCGGTCAGAGGCTAATAGTGATACTTCACAAGATGGTCAGAGATCTGACAGGGATGATTCTGATTATGAGGAGGAAATGGAGTTGGACTTTGAAACATCAGTATCTGGTGACGAGGAACATGATTCTGATTCAAATATTCTTCACCGCAGTTTGAATCTTAGAATTCATCGAAGAGGTGACTCGAGAGAAAATGTTGAAGCAAGTGGCTCGGACGAATCACCCTCATCATCATCATCATCACAGAATGGTAGAGCTTCATACCAGCCCGAAGCAGCTATTGATATGAAGCAGAGGTTTATTGGGCACTGCAATGTGGGGACTGATATAAAACAGGCTAATTTTCTTGGTCAAAAAGGTGAATATGTTGCCAGCGGTAGTGATGATGGCAGATGGTTTATTTGGGAAAAGCGGACTGGAAGACTCATGAAATTGCTGAGTGGCGATGAATCTGTTGTAAATTGCGTACAATGTCATCCATTTGATTTTGTTGTGGCAACAAGTGGGATTGATAACACAATAAAGATATGGACTCCAAGTGCTCCTGTTGCATCTTCTGTAGCTGGTGGTTCTGCAGGACCAGAAACTGGTGATGTGTTGGGTGCTATGGAGAACAATCAACAAAAGTTATCCCGTAATAGGGATTCAATGCTGCCCTTTGAGCTCTTAGAACCATTTAGAATGCATGAGTTTCCTGAAGGATCACTACGCTTGCGACCTTTTGAATGTGCCCAAACCTAA 2280 0.4184 MDSSPFLDGNIHRILDSRYLHSRPDVNQSLQTHSSLIRRLSQEKELEGHLGCVNAIAWNSKGSLLVSGSDDTRINVWSYAGQKLVHSIDTGHTANIFCTKFIPETSDELVASGAGDAEVRLFNRSRVSGNGLNDNPITPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSPRQECHNVLLDLRNGAKRSLGDPPKQVLALKSFDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSCGKRMPPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGSEVLLSYSGEHVYLMNVNHAGVNEVQYSSGDVSKLMTYSPSVNGLELQPFVSNVFTNGFHTKKNITAKLDKCRKLIKYGKKSLDEGAPYYGIEACNEVLIGYNHIIGPALKQECLCTRAALLLKRKWKNDAHMAIRDCHAARKFDKSAYKPLYYMSEALSQLGKHKEALDFAVASHSLAPSKSEVAERVENAKKDIVLAETEKNSKTNNGRGGRMLSLSDILYRSEANSDTSQDGQRSDRDDSDYEEEMELDFETSVSGDEEHDSDSNILHRSLNLRIHRRGDSRENVEASGSDESPSSSSSSQNGRASYQPEAAIDMKQRFIGHCNVGTDIKQANFLGQKGEYVASGSDDGRWFIWEKRTGRLMKLLSGDESVVNCVQCHPFDFVVATSGIDNTIKIWTPSAPVASSVAGGSAGPETGDVLGAMENNQQKLSRNRDSMLPFELLEPFRMHEFPEGSLRLRPFECAQT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3591 759 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 22 756 - -
Mtr3g3591 759 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 46 78 - -
Mtr3g3591 759 Gene3D - 28 129 IPR015943 GO:0005515
Mtr3g3591 759 Gene3D - 528 697 IPR015943 GO:0005515
Mtr3g3591 759 Gene3D Tetratricopeptide repeat domain 348 487 IPR011990 GO:0005515
Mtr3g3591 759 MobiDBLite consensus disorder prediction 571 601 - -
Mtr3g3591 759 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 22 756 IPR045151 -
Mtr3g3591 759 SUPERFAMILY WD40 repeat-like 39 690 IPR036322 GO:0005515
Mtr3g3591 759 MobiDBLite consensus disorder prediction 516 559 - -
Mtr3g3591 759 Coils Coil 473 500 - -
Mtr3g3591 759 SUPERFAMILY TPR-like 403 476 IPR011990 GO:0005515
Mtr3g3591 759 ProSiteProfiles Trp-Asp (WD) repeats profile. 659 690 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 136 176 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 652 691 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 606 649 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 211 244 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 81 123 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 265 307 IPR001680 GO:0005515
Mtr3g3591 759 SMART WD40_4 39 78 IPR001680 GO:0005515
Mtr3g3591 759 MobiDBLite consensus disorder prediction 582 601 - -
Mtr3g3591 759 Pfam WD domain, G-beta repeat 44 78 IPR001680 GO:0005515
Mtr3g3591 759 Pfam WD domain, G-beta repeat 613 648 IPR001680 GO:0005515
Mtr3g3591 759 Pfam WD domain, G-beta repeat 656 690 IPR001680 GO:0005515
Mtr3g3591 759 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
Mtr3g3591 759 Gene3D - 130 335 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3591 K11807 - gmx:100793917 1251.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3591 3 49776286 49788612 Mtr3g3591 3 49776286 49788612 ECH