Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3581 ATGAAAATTAAATTGGCTACGGCCTTAATACTTTGCTCTGCAATTTTCATGAGCATGAGCAATGCCACTGATCCATGTGCATCTCAACCAGATGACTCCGATCTCAACGTAATTCCCATGTATGGAAAATGCTCACCATTCAACCCACAAAAAACAGACTCATGGGACAATAGAGTCCTAAACATGGCCTCCAAAGATCCAGCCAGAATGAGCTATCTATCCTCTTTAGTAGCCCAAAAGACCGTCTCTTCGGCCCCAATTGCTTCGGGCCAGGCCTTCAACATTGGCAACTACATAGTCCGTGTTAAAATCGGAACACCCGGTCAACTCCTCTTCATGGTCCTTGACACAAGCACCGACGAGGCTTTTATCCCTAGCTCTGGCTGCATTGGTTGCTCCGCAACAACTTTCTCACCCAATGCCTCCACCAGTTATGTGCCATTGGAGTGTTCCGTTCCACAATGCAGTCAGGTCCGTGGGCTCTCATGTCCAGCCACGGGCTCTGGCGCATGTTCCTTCAACAAATCTTACGCAGGTTCGACTTACTCTGCCACACTTGTTCAAGATTCACTTAGATTAGCTACGGATGTTATCCCTAGCTACTCTTTTGGATCCATCAATGCTATCTCTGGTTCTTCAATTCCAGCCCAAGGACTTTTGGGCTTGGGCCGTGGCCCGTTATCTTTATTATCACAAACCGGGTCACTTTACTCGGGTGTATTCTCCTACTGCCTTCCAAGTTTCAAATCTTACTATTTTTCCGGGTCACTTAAACTTGGACCCGTGGGTCAACCCAAAAGCATTCGAACCACACCACTTCTTCGCAATCCTCGCCGTCCATCTCTTTATTTTGTCAATTTAACCGGAATTACCGTGGGAAAAGTAAATGTACCTTTCCCCAAAGAACTTTTAGCGTTCGACGTGAATACCGGATCCGGAACCATAATTGATTCGGGTACAGTTATTACCCGTTTTGTGGAACCCGTTTACAACGCGGTTAGGGATGAGTTTAGAAAACAAGTAACCGGACCTTTTTCGAGCTTAGGAGCATTTGACACATGTTTTGTGAAGAACTATGAAACTTTGGCACCAGCTATTACATTGCATTTCACAGATTTGGATCTAAAATTACCATTGGAGAATAGTTTGATCCATAGCAGTTCAGGATCATTGGCTTGTCTTGCAATGGCGTCTACACCAAAGAATGTGAACTACACTGTGTTGAATGTGATTGCTAATTATCAACAACAGAATTTGAGGGTTTTGTTTGATACCGTGAATAATAAGGTTGGTATTGCCCGTGAGCTTTGTAACTAG 1317 0.4457 MKIKLATALILCSAIFMSMSNATDPCASQPDDSDLNVIPMYGKCSPFNPQKTDSWDNRVLNMASKDPARMSYLSSLVAQKTVSSAPIASGQAFNIGNYIVRVKIGTPGQLLFMVLDTSTDEAFIPSSGCIGCSATTFSPNASTSYVPLECSVPQCSQVRGLSCPATGSGACSFNKSYAGSTYSATLVQDSLRLATDVIPSYSFGSINAISGSSIPAQGLLGLGRGPLSLLSQTGSLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPRRPSLYFVNLTGITVGKVNVPFPKELLAFDVNTGSGTIIDSGTVITRFVEPVYNAVRDEFRKQVTGPFSSLGAFDTCFVKNYETLAPAITLHFTDLDLKLPLENSLIHSSSGSLACLAMASTPKNVNYTVLNVIANYQQQNLRVLFDTVNNKVGIARELCN* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3581 438 Pfam Xylanase inhibitor C-terminal 283 433 IPR032799 -
Mtr3g3581 438 Gene3D Acid Proteases 73 260 IPR021109 -
Mtr3g3581 438 PANTHER ASPARTYL PROTEASE-RELATED 7 438 IPR001461 GO:0004190|GO:0006508
Mtr3g3581 438 Gene3D Acid Proteases 261 438 IPR021109 -
Mtr3g3581 438 ProSiteProfiles Peptidase family A1 domain profile. 98 433 IPR033121 -
Mtr3g3581 438 Pfam Xylanase inhibitor N-terminal 98 260 IPR032861 -
Mtr3g3581 438 PANTHER ASPARTYL PROTEASE AED3 7 438 - -
Mtr3g3581 438 SUPERFAMILY Acid proteases 91 437 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3581 Mtr-Chr3 49681930 49683625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3581 88 438 Miscellaneous Gene Families AT1G77480 26.154 7.00e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3581 - - gmx:100816307 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3581 3 49681930 49683625 Mtr3g3581 3 49681930 49683625 ECH