Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3575 ATGAACGAGTCTCCACGTAGAGATCTCGAAGTCTTCGATTCCAAGGTTGAAGATGATGAGAATAACCCCGATAAAAACCTCAATAGATTCAACAAAATCTCTAATCTCGATCCCTTCACTCACGTGTATCAATCACGTAGAAACAAAAACAACACTGTTCTGGCAACTCACCAGCTTCAGGTGGAAGTGAAACAAGAAAATGTATTACAAGATGCCCAGATCAACTCGGTTGATGTCAAGAATGTCCCCAGTATTCCCTGTGTTGATGTGGTTGGCAGTATTTTAGATTTGGAAGTAGGTTGTTCAAACCCCTCTTTCGAAACAATGGAAGATACTTTTGATAGCAAAGTGAAGAATTCTGAGTTAGGAGCTGACAGTCAATCAAATTCCATTAGTCAGGAGAATCACTGTCATTTTAATATAAATGTTGATTACTATGACCGACCAGAGAATAGTGATACAACTAGTGGTGCATCTACACCTGAGACGAGCCAGATTGGTCCTTCAGGGTCTCCATCCAGTAAAGAATCTGTTGACGTTAGTTCTGACGCTGATGATTGCATGAACTACGAGAGTGCTCCAAGAAGTGCTGTTTCTGATATTGCAGAGAACGGTGTATTTCATCGTAATCCTATTTTCATAATTTCAGTTTCACTGAATGGTTGTGGATTGGATGGTGCTCTCATCTCTGACGCCTCTGATACGGATGACACGAATACAGAAGTTGTCCTTCGTCCTGATTATATAATTTACCAAGATAATTATTATACGGGGCCAATGTTAACCTTCTCACATAGTTGCATCAAGATCAATGTTTCAACTGCATGTATGGAGCACGAGGCCTTTGATCTTGAATGGGGAATTGATGATCTCATTGATATTAAGTGTCAGTCGATTCAAAGTAGTGGAACGGTCATCATAAAGATTAATGTGATATCAAGGAATGCAAATCAGGTAGATCATGCAAGTGAAACTTCAGGCATCGAGGAATTGAAGATTGCAGTTGTTGATTCCAATTGGTCCCTGATACATAAACAGATCACATCCCTGAATGTGAAATACTTGGCTATTTGTAACATCATGCTTCATTTGGATGTGGAAGATGACGAAACTAAATCAGGTGGATCAAGATGCTACTTTCCTAATTTTGAGGAGCCTTTTGATGAAGTCATCTATCCTAAAGGGGATGCAGATGCTGTTTCTTTAAGCAAGAGAGATTTTGATCTATTACGACCAGACACATTCGTTAATGACACAATAATTGACTTTTACATCCAGTATCTGAAGAATCAGATACAAGAGGAAGAAAAACCTAGATTTCATTTTTTTAATAGTTTTTTCTTTCGAAAGCTGGCTGATTTGGACAAAAATCCATCTAGTATTTCGGATGCAAAAGCAGCATTTCAACGTGTTCGTAAATGGACCAGAAAAGTAAATTTATTTGAAAAGGATTACATCTTCATCCCTGTGAACTTCAATCTTCATTGGAGTTTAATAGTCATATGTCATCCGGGTGAAGTGATTAATAATGATAAAGAGTTGGACAACGCACTTAAGGTGCCCTGCATATTGCATATGGATTCTATAAAAGGAAATCACAGCGGTCTGAAAAACCTGCTCCAAAGCTACTTGTGGGAAGAATGGAAAGAAAGACATAAAGAGGCATCGGAAGAAGACTTTTCAGCATTATTTTCAAATTTGCGTTTTCTCCCCCTTGCGTTGCCACAGCAAGAAAACTCATATGATTGTGGCCTCTTTCTGCTGCACTACCTAGAGCTCTTCCTTGCTGAAGCTCCTCTTACTTTCAATCCATTCAAAGTAACCAAGTTTTCCAATTTTCTCAATGTGGACTGGTTTCTGCCTGCTGAAGCTTATCTCAAGCGAACACTGATCCAGAGGCTGATATCTGAACTCGTGGAAAACCATGGTTCACGTGAAATCTCGTCCTCTGATGGTAGTGATGATCACCAGTACATCGAAAATATTGAGAATGGAACTGGTATTGAGCATCTTGAGTTCAACAGTGCGTCAAAACCTTCCCATGCTGGGGAGGGAATAGAAATGACTCTATTGTCCGGATCATCGTTTTTGGATCCTCAATCTTTTAACAACCCGGGCATGGTTCTCAAGGATCTTTTTGAGCCAGGTACTACAGCAGGAACAACATCGGCACAGTGCCAATCTTTTGACCAGCGATCATCTGATTATCGCTTCGATAATTCAATATTTACGATGGAGGAAGACACAGATCTTGGTGAACAATTTATGTATTTGGCCACAGATACCAACTTCCAGCAAGTGGCTGGAGTTACACCTCAAGCATGTTCTTTGCCTTACCTTCCAAGGGATTGTGGAAATGGGACTAATCACATACCAGAAATCTCTCTGCAAGAGGCAGTGTCATCACCAAGTAGTGCCTCAGGTGATACAGAAGACATTGGGGTCACTGAATACTGCCATGGAGATTGGAATGAGCCCATAACATCTTATGAGGCAGAACGAGGTGAAAAAATCTGTTCACCCATAGAAAATACTGAGCATTTTATAGATATTTCTGGTTCTGCTGGCAACAATTTTCCAACACCCTCGGTTGTGGGAATTTCTCAAGACTCCATTATGAGTTGTGATGGTTACAAGAATGGTGATATTCACTCTCCCTATCAGGAAACGACCACATTAACATGGCATCAAGTATCTGATGCAGTCGTAGATGATGAGACCGCTTGCGATGGTCAGATAGATATTTCTGGCTCTGCTGGCAACAATTTGCCAACATCCTCGGTTGTGGGAATTTTTCAAGAACCTAATTGTGATGGTTACCAGAATGGAGATATTCACTCTCCCTGTCTGGAAACTCCTACAGTAACATTGCATCAAGTTTCTGATGCAGTAGACGAGGAGGCAGCATGCGACGATGGTAAGATGATTGATGGTACGGAACCTGATAATTCTGAGGAACAAGCTGCAAAGCGGAGGCGAGTTATGCCTCTAGAAGGCAGAAGTGAAGAAATTGTGACAGAATCCAATTTGTAG 3033 0.4072 MNESPRRDLEVFDSKVEDDENNPDKNLNRFNKISNLDPFTHVYQSRRNKNNTVLATHQLQVEVKQENVLQDAQINSVDVKNVPSIPCVDVVGSILDLEVGCSNPSFETMEDTFDSKVKNSELGADSQSNSISQENHCHFNINVDYYDRPENSDTTSGASTPETSQIGPSGSPSSKESVDVSSDADDCMNYESAPRSAVSDIAENGVFHRNPIFIISVSLNGCGLDGALISDASDTDDTNTEVVLRPDYIIYQDNYYTGPMLTFSHSCIKINVSTACMEHEAFDLEWGIDDLIDIKCQSIQSSGTVIIKINVISRNANQVDHASETSGIEELKIAVVDSNWSLIHKQITSLNVKYLAICNIMLHLDVEDDETKSGGSRCYFPNFEEPFDEVIYPKGDADAVSLSKRDFDLLRPDTFVNDTIIDFYIQYLKNQIQEEEKPRFHFFNSFFFRKLADLDKNPSSISDAKAAFQRVRKWTRKVNLFEKDYIFIPVNFNLHWSLIVICHPGEVINNDKELDNALKVPCILHMDSIKGNHSGLKNLLQSYLWEEWKERHKEASEEDFSALFSNLRFLPLALPQQENSYDCGLFLLHYLELFLAEAPLTFNPFKVTKFSNFLNVDWFLPAEAYLKRTLIQRLISELVENHGSREISSSDGSDDHQYIENIENGTGIEHLEFNSASKPSHAGEGIEMTLLSGSSFLDPQSFNNPGMVLKDLFEPGTTAGTTSAQCQSFDQRSSDYRFDNSIFTMEEDTDLGEQFMYLATDTNFQQVAGVTPQACSLPYLPRDCGNGTNHIPEISLQEAVSSPSSASGDTEDIGVTEYCHGDWNEPITSYEAERGEKICSPIENTEHFIDISGSAGNNFPTPSVVGISQDSIMSCDGYKNGDIHSPYQETTTLTWHQVSDAVVDDETACDGQIDISGSAGNNLPTSSVVGIFQEPNCDGYQNGDIHSPCLETPTVTLHQVSDAVDEEAACDDGKMIDGTEPDNSEEQAAKRRRVMPLEGRSEEIVTESNL* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3575 1010 MobiDBLite consensus disorder prediction 145 186 - -
Mtr3g3575 1010 SUPERFAMILY Cysteine proteinases 389 610 IPR038765 -
Mtr3g3575 1010 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 8 1004 - -
Mtr3g3575 1010 ProSiteProfiles Ubiquitin-like protease family profile. 400 594 IPR003653 GO:0006508|GO:0008234
Mtr3g3575 1010 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g3575 1010 Pfam Ulp1 protease family, C-terminal catalytic domain 415 615 IPR003653 GO:0006508|GO:0008234
Mtr3g3575 1010 Gene3D - 440 571 - -
Mtr3g3575 1010 MobiDBLite consensus disorder prediction 972 1000 - -
Mtr3g3575 1010 Gene3D - 392 636 - -
Mtr3g3575 1010 MobiDBLite consensus disorder prediction 147 178 - -
Mtr3g3575 1010 MobiDBLite consensus disorder prediction 1 29 - -
Mtr3g3575 1010 MobiDBLite consensus disorder prediction 972 1010 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3575 Mtr-Chr3 49606116 49619031 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3575 K08596 - gmx:100800444 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3575 3 49606116 49619031 Mtr3g3575 3 49606116 49619031 ECH