Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3560 ATGGGTTCACTACCTAATTTGGAAACTCCTCCCCAAATTTCAAGAATTTCAACAGTAGTTCCAGCAACCCCTCGTGGTGAAGAAAATAGTGCATATAATCTCAACTACATGGACCTGCTTATGAAACTCCACTATATCCGATCCATATACTTGTTCAATTCTAAAGCGGTTCAAAACCTCTCAATATCTGACTTAAAAGCACCAATGTTTCAACTACTTGATTCATACTCACATGTTTCAGGTAGGGTTAGAATATCAGAATCAGGAAGACCGTTTATCAAGTGCAACGACGCGGGTGTGCGAATAGCAGAGTCACACTGTGAGAAAACACTGCGTGAATGGTTGGATGAGAAAGAGTACTCTGTTGATGAACTTGTATATGATCATGTGCTTGGTCCTGATCTTGCATTTTCTCCTTTGGTTTTTGTCAAGTTCACATTCTTCAAATGTGGAGGACTCTCAGTGGGACTGAGCTGGGCTCACATTCTTGGAGATGCATTTTCAGCTCGTAACTTCATCACCAAGTGGAGTCACACCCTAGCTGGTCAAGCTCCACCAAAATCTCTCCACATGCCAAATCTCACTAAACCTCAATTCTTATCGAATTCTGTTTATGATAATCCCATTTCCATTAAAAGGGCAACAACAATTGAAGAATATTGGCTCGCTGCCACTGATAGTTATGTAGCTACTCACACTTTTCACATCACTTCCAAACAACTTCATCATTTGTTAACAACATCCACATCAACCAATATCAATATCAATACCAAGACAAAGTATTTTGAAATTATTTCAGCTATGATTTGGAAATGTATAGGACAAATAAGAGGAAACTTTGGACCTAGGGTTGTGACAATATGTACTACAAATATCTCTAATCGCGCTGAAAATGAATTCCCGACAAATGGCTCGGTGTTGAGCAAAATCGAAACAAGTTTATCACCTGGGGAATCTGAAATATCAGAATTAGTGAAGCTAATTGCTGAGAAAAAAATGAACGAGAATCATGGATTGGAAAAAATGATGGAGGAAGGTGAAGGAAAAGATGATTTTATTGTTTATGGAGCAAAGTTAACATTTGTAGATTTGGAAGAAGGTAATTTTTATGGTGTAAAGATTAATGGGCAGAAACCAATTTTGGCAAATTGTGATTTTCGTGGTGTGGGTGATCAAGGAGTTGTTTTGGTTCTTTCAGGACCAGAAGATTACAATGGTAATAATGGAAGGATGGTAACAATTTCTTTACCTGGGAAAGAACTTGACCAATTGAAATGTAAACTAGCACAAGAATGGGATATACAATATTGTTCGAGTCTTGGACTTTGTTAA 1332 0.3784 MGSLPNLETPPQISRISTVVPATPRGEENSAYNLNYMDLLMKLHYIRSIYLFNSKAVQNLSISDLKAPMFQLLDSYSHVSGRVRISESGRPFIKCNDAGVRIAESHCEKTLREWLDEKEYSVDELVYDHVLGPDLAFSPLVFVKFTFFKCGGLSVGLSWAHILGDAFSARNFITKWSHTLAGQAPPKSLHMPNLTKPQFLSNSVYDNPISIKRATTIEEYWLAATDSYVATHTFHITSKQLHHLLTTSTSTNININTKTKYFEIISAMIWKCIGQIRGNFGPRVVTICTTNISNRAENEFPTNGSVLSKIETSLSPGESEISELVKLIAEKKMNENHGLEKMMEEGEGKDDFIVYGAKLTFVDLEEGNFYGVKINGQKPILANCDFRGVGDQGVVLVLSGPEDYNGNNGRMVTISLPGKELDQLKCKLAQEWDIQYCSSLGLC* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3560 443 Gene3D - 12 215 IPR023213 -
Mtr3g3560 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 432 - -
Mtr3g3560 443 Pfam Transferase family 17 425 - -
Mtr3g3560 443 Gene3D - 225 427 IPR023213 -
Mtr3g3560 443 PANTHER PROTEIN ECERIFERUM 2 10 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3560 Mtr-Chr3 49462282 49465093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3560 9 425 Acyl Lipid Metabolism Gene Families AT4G24510 40.139 2.87e-98 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3560 - - mtr:MTR_3g100150 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3560 3 49462282 49465093 Mtr3g3560 3 49462282 49465093 ECH