Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3557 ATGGAGATTACAGAGAAACAAGCGATGTACCGCGACATCGGTTTACAAGTCATCATGATCCTCGCAATGGCTTTAATCTTCCTCAGCATGCACGGAATTCCTCAAAAATTCCTCGCAAAACTCCGATTCCAAAACCGAAAAGCAATCAAAGCAAAGCGGCACTTCGTACGTGGCGCTCAGCTTCTCACACAAGCTAGATCTTCCAAAAACAAATCCAGATCCGCCATCAACAACCTCGCAAACGAAGCCTTAGGCGAAGCCGAAAAAGCGATCGAACTCGATCCAAAAGACGCCGCTTCGTATCTTCTCAAAGCTATGATTCTCGATCTTCAAGGTTTTCGTACTTCCGCTCTTGAATCACTCGACGCCGCGTTGTCTCCTCTCGCCGCCGGTTCGCTTGAGCAAGGTGAACGTGGTGATGCGTTGTTTAAGAGAGCTGAGTTGAAACTTGCAACGAGTGAACGCGGACGAGTTGACTCGGCGTTAGCGGATTTGACTGAGTCGGTGATTTTGAGTCCGAAAAACGCCAAAGCTTGGTGTGCGTTGGGAGAGTGTTATGAAGGGAAGAAGATGGACGAGGAAGCGAAGAAAGCTTATAAGGAAGCTCATGAATTGGCGCCACAATATTCAGTGCCTGTAGAAGCACTTAACAGCAATGTAACAAAAGATTAG 672 0.4747 MEITEKQAMYRDIGLQVIMILAMALIFLSMHGIPQKFLAKLRFQNRKAIKAKRHFVRGAQLLTQARSSKNKSRSAINNLANEALGEAEKAIELDPKDAASYLLKAMILDLQGFRTSALESLDAALSPLAAGSLEQGERGDALFKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGECYEGKKMDEEAKKAYKEAHELAPQYSVPVEALNSNVTKD* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3557 223 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 219 - -
Mtr3g3557 223 SUPERFAMILY TPR-like 60 209 IPR011990 GO:0005515
Mtr3g3557 223 Gene3D Tetratricopeptide repeat domain 29 133 IPR011990 GO:0005515
Mtr3g3557 223 SMART tpr_5 176 209 IPR019734 GO:0005515
Mtr3g3557 223 SMART tpr_5 139 175 IPR019734 GO:0005515
Mtr3g3557 223 Gene3D Tetratricopeptide repeat domain 134 218 IPR011990 GO:0005515
Mtr3g3557 223 Pfam Tetratricopeptide repeat 176 209 IPR013105 -
Mtr3g3557 223 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Mtr3g3557 223 PANTHER - 10 219 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3557 - - gmx:100799725 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3557 3 49440276 49442782 Mtr3g3557 3 49440276 49442782 ECH