Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3543 ATGGCAGTTCATTCAACCTTCTTATTCAATTCTTCTTCATTGACATTCTCTTTTCACTCTCATTTCAATTTTCACAATCTCAAACTCAAAAACAAAACTTTTAACCTAAATTCAAATTCAATGTCTTCTTCACTTCCTATAAAATCACCATTCCATTTACCTTCTTCCAATCTCAAACATCGAACCGTTTTCAAATTCCAATCTTCATCTTCTTCCTCTTCTTCCGATTGGTCCACTGCAACTAAAAAAACTGTTTTATTAACCTCCGCTACTACAGTTTCTTTAGCTGTTGCTAATCGCGTTCTTTATAAATTAGCTCTTGTTCCTATGAGTAATTACCCTTTTTTTCTCGCTCAATTAAATACTTTTGGGTATGTTGTTATATACTTTAGCATTTTGTACATACGATACCGGTTAGGAATTGTTACAAATGAGATGCTTGCGATTCCAAAATGGCGGTTTTTTGTTATTGGGTTTTTGGAAGCTTTGGGATTGGTTTCTGGAATGTCTGCTGGAGCAATACTTCCTGGACCAGTCATACCCATACTGAATCAGACTTTTTTAGTTTGGCAGTTGATGTTTTCCGCTCTTATCCTGAGGAGAAGGTACTCAATTAACCAAATTGTTGGGTGTTTACTAGTAGCTGCTGGTGTGGTGATTGCTATCTCAAGTGGCTCTAATGCAGGTCAAATGCTCTCTAAAGTTGATTTCGTGTGGCCAGCATTGATGATAGTTTCTTGTGCCTTTCAAGCCGGTGCTTCAATAATCAAGGAATTTGTTTTTCTTGATTCTTCCACTCGATTAAAGCAAAAGTCGTTGGATATATTTGTGGTCAATTCTTTTGGATCTGGATTTCAGGCTCTTTTCGTGCTTCTCTTTCTACCTTTAATCTCTAACTTGAAAGGAATACCGTTTGTTCAACTACCTTCATATCTTAAAAGTGGTGCTGGTTGCTTTCTAAACATTGGAGCTGGTAAAACAGGTTGTGAAGGTGCTCCCTTGCTTCCGCTGCTCTACGTAGTTACCAATTTGGCATTCAACATCTCCCTGCTTAATGTACTAAAAAGTTCTTCTGCAGTTGTTGCTTCTCTCATGTTAATGTTGTCAGTGCCAATTTCTGTTTATGTTCTTTCCCTTCCATTACCGTATCTTCCCGAGGGAGGAACAACATTGAGCCCATTCTTTCTACTTGGTTGTGCAATTCTGGTATGTGGGCTTTATACATACAACACTACCCGACCTGCAAGGAATAGTTCAGAAGTTGACTGA 1269 0.3806 MAVHSTFLFNSSSLTFSFHSHFNFHNLKLKNKTFNLNSNSMSSSLPIKSPFHLPSSNLKHRTVFKFQSSSSSSSSDWSTATKKTVLLTSATTVSLAVANRVLYKLALVPMSNYPFFLAQLNTFGYVVIYFSILYIRYRLGIVTNEMLAIPKWRFFVIGFLEALGLVSGMSAGAILPGPVIPILNQTFLVWQLMFSALILRRRYSINQIVGCLLVAAGVVIAISSGSNAGQMLSKVDFVWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLDIFVVNSFGSGFQALFVLLFLPLISNLKGIPFVQLPSYLKSGAGCFLNIGAGKTGCEGAPLLPLLYVVTNLAFNISLLNVLKSSSAVVASLMLMLSVPISVYVLSLPLPYLPEGGTTLSPFFLLGCAILVCGLYTYNTTRPARNSSEVD* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3543 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 225 - -
Mtr3g3543 422 Pfam CRT-like, chloroquine-resistance transporter-like 85 409 IPR013936 -
Mtr3g3543 422 PANTHER PROTEIN CLT2, CHLOROPLASTIC 34 417 IPR013936 -
Mtr3g3543 422 PANTHER PROTEIN CLT2, CHLOROPLASTIC 34 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3543 Mtr-Chr3 49235525 49243036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3543 - - ccaj:109802647 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3543 3 49235525 49243036 Mtr3g3543 3 49235525 49243036 ECH