Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3533 ATGACATTCTTTAAGGCTTTGGTTTTATGCTTCTTTTTAGCGATCACTATGCCATTGCCGACTCTGGCAACAAACCACATTGTTGGAGATGGTTTAGGTTGGACAGTTGATTCTGATTATACAACATGGGCTAGTGACAAAACCTTTGTAGTTGGTGACAGTCTCGTGTTCAACTATGAAGCTGGGTGGCACACAGTGGATGAAGTTAGGGAAAGTGACTATCAATCATGCACAACTAGAAATTCAATTAGTACAGACGGTAGTGGTGCCACAACCATTCCCCTCAAAAAAGCAGGAACTCATTACTTCATATGTGCTGTTCCTGTACATTGCATAAGTGGTGGCATGAAACTCTCTGTTAAGGTTCAGGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTCCTTCTGCTGCACCATCACCATCAGGAAAAGGTTCACCTTCTTCCGATGACACCCCCGCCGCAACAACAACCACCACCACCATTCCTACCATTGCAGCACCATCACCATCAGGAAAAGGTTTACCTTCCGATGACACCCCCGCCGCAACAACCACCACCACTCCTACCATGCAAAGTGCATCTTCAGCTACTTGTATCTCACCAATTGTTGCCTTCTTTTTTATTGTTTCATGGATCTTGATCAATTAA 663 0.4374 MTFFKALVLCFFLAITMPLPTLATNHIVGDGLGWTVDSDYTTWASDKTFVVGDSLVFNYEAGWHTVDEVRESDYQSCTTRNSISTDGSGATTIPLKKAGTHYFICAVPVHCISGGMKLSVKVQDSSSSSSSSSSSSSAPSAAPSPSGKGSPSSDDTPAATTTTTTIPTIAAPSPSGKGLPSDDTPAATTTTTPTMQSASSATCISPIVAFFFIVSWILIN* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3533 220 PANTHER BLUE COPPER PROTEIN-LIKE 8 137 - -
Mtr3g3533 220 MobiDBLite consensus disorder prediction 123 195 - -
Mtr3g3533 220 SUPERFAMILY Cupredoxins 23 123 IPR008972 -
Mtr3g3533 220 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Mtr3g3533 220 Gene3D - 22 129 IPR008972 -
Mtr3g3533 220 CDD Phytocyanin 24 122 - -
Mtr3g3533 220 ProSiteProfiles Phytocyanin domain profile. 24 124 IPR003245 GO:0009055
Mtr3g3533 220 MobiDBLite consensus disorder prediction 123 171 - -
Mtr3g3533 220 PANTHER BLUE COPPER PROTEIN 8 137 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3533 Mtr-Chr3 49155795 49156814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3533 5 146 Miscellaneous Gene Families AT2G32300 40.559 5.28e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3533 - - mtr:MTR_3g099680 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3533 3 49155795 49156814 Mtr3g3533 3 49155795 49156814 ECH