Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3513 ATGAGAAGACCAATGAAACACCCACACAAGAAGAATCACAATCAAGACTTCTTTGAAGATTTTCCCGATGATATCGTCGTCTTTATCCTCACCAAGCTCAGCTCTACTGCCTCTTCTCCTTCCCATTTCTTTAACACCCTTTTAACATGCAAGAGACTGAACCGTTTGGGTTTTCATCCTATGGTTTTATCGAAAGCTGGGCCAAAAGTACTCGCCGTTAAGCCCAAAAACTGGTCTGAGAACTCTCACCATTTTCTTAAACGCTGTGTTAACGTCGGTAACGTCGATGCTTGTTATACTCTTGGAATGATCCGATTTTACTGTCTACGAAATCGAAGAAGTGGAGTATCTCTAATAGCCAAGGCGGCGATGAAGTTACACGCGCCGGCGCTATACTCACTCGCGGTAATTCAGTTCAACGGAAGCGGAGGCACTAAACAAGACAAAGATCTACGTGCTGGAGTAGCACTTTCTGCACGCGCGTCACTTCTCGGCCATATCGACGCGCTTCGTGAGTTAGGCCATTGTCTTCAAGACGGTTACGGCGTCAAACAGAATGTCACGGAGGGACGACGGTTGTTGGTGCAAGCTAACGTGAGAGAGATTTTACTAGTCTATCGCTTTCTTGAGTTAGCGTCACCTTCACGCGCTGGTTCTTGTGAAGGGATACTGAGTCGCCTGAGTAACATGGCGGTGCCGTTGATAAAAGAGAATAGGTACAACGTGAAGGTGCCGGAGGTGCATCCGGTGAACTGGTTTTTGAGAGAGTGGTTTGAATCTGGTTTAGGGATTCTGGAAGATGGGTTGAGGCTGTGTGCGCATATCGGTTGTGGACGGGCGGAGACGCGGCCGCATGAGTTCCGGCGGTGTTCGGTTTGTGGGAAGGTTAACTATTGTTCTAGGGCATGTCAGGCACTGGATTGGAAATTGCGGCATAAGATGGAGTGTTCGCCGATGGAATGGTGGTTGGATGAGAATGGTGGTGGTGGTGATGGTTTTGTAGTTGGCGGCGGCGGGGATATGAACATGGGAGATGATGCGGTGGCAGCTGATTAG 1056 0.4886 MRRPMKHPHKKNHNQDFFEDFPDDIVVFILTKLSSTASSPSHFFNTLLTCKRLNRLGFHPMVLSKAGPKVLAVKPKNWSENSHHFLKRCVNVGNVDACYTLGMIRFYCLRNRRSGVSLIAKAAMKLHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSARASLLGHIDALRELGHCLQDGYGVKQNVTEGRRLLVQANVREILLVYRFLELASPSRAGSCEGILSRLSNMAVPLIKENRYNVKVPEVHPVNWFLREWFESGLGILEDGLRLCAHIGCGRAETRPHEFRRCSVCGKVNYCSRACQALDWKLRHKMECSPMEWWLDENGGGGDGFVVGGGGDMNMGDDAVAAD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3513 351 SUPERFAMILY F-box domain 3 65 IPR036047 GO:0005515
Mtr3g3513 351 SUPERFAMILY HIT/MYND zinc finger-like 270 320 - -
Mtr3g3513 351 PANTHER MYND DOMAIN-CONTAINING 7 329 IPR044508 -
Mtr3g3513 351 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 7 329 - -
Mtr3g3513 351 SUPERFAMILY HCP-like 80 197 - -
Mtr3g3513 351 Gene3D - 265 320 - -
Mtr3g3513 351 ProSiteProfiles Zinc finger MYND-type profile. 274 316 IPR002893 -
Mtr3g3513 351 Pfam MYND finger 277 316 IPR002893 -
Mtr3g3513 351 Gene3D Tetratricopeptide repeat domain 72 202 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3513 Mtr-Chr3 48972396 48974048 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3513 - - cam:101501389 496.508