Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3512 ATGGAGATCGAGCTCAATGACTTGATCACCGATCTTCAATCTCTCAATCAATCCCTTCCAGATCCATCTCTTCGCGATGCCTTCCATAAGATTCAATCACACGTTGAACATATTGCTGATCTTGTTAGGGCTCAACCTGTTCGCCGCACAAAAGTTAAGGATATGAGTGCTGAGGTTGTAGACAGCAATCCCTACAGTCGACTTATGGCGCTTCAGAGAATGGGAATTGTGGAGAATTACGAACGGATAAGGGATTTCTCCATTGCCATAGTTGGAATAGGTGGTGTAGGAAGTGTAGCTGCTGAGATGCTAACAAGATGTGGTATTGGTCGACTTTTGTTGTATGATTATGACAAAGTGGAACTTGCAAACATGAATAGGCTCTTCTTTCGTCCTGATCAAGCTGGTATGACAAAGACAGATGCAGCTCTACAAACACTTTCAGATATAAATCCTGATGTTGTGCTTGAGAGCTTTACACTGAATATCACAACAGTGGATGGTTTTGAAACCTTTATGTCATCTTTGAAAAATAAGTCATTTCGTCCTGATAAACAAGGTAGCGGTGTGGACCTTGTCTTAAGCTGTGTAGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCTTGTAATGAACTGAGCCAGACATGGATGGAGTCAGGTGTTTCCGAGGATGCCGTTTCTGGTCACATTCAGTTACTTATTCCTGGAGAAACGGCCTGTTTTGCATGCGCTCCTCCTCTTGTTGTAGCATCTGGGATTGATGAGCGTACACTCAAGCGTGAAGGGGTTTGTGCTGCATCTTTACCAACTACCATGGGGGTTATTGCTGGGCTTCTTGTCCAAAACACACTAAAGTTCTTGTTAGGTTTTGGTCAAGTCTCTCCTTATTTGGGATATAACTCTCTTAAAGATTTTTTCCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGCAGCTTGCTTAAAACGACAGGGCGAGTACATTCTTGCAAAGCCAACAAGGGATGCTGCCGCAAAAGCAAAATTGGAGGCTGAAGGACCATTAATTGAAGAAGGTCCACTGCACGATGATAACGAATGGAATATAAGCGTCGTTGATGATTGTGAGCCAGATGGTGCCAATACCAAAAGTTCAGATGCCCTTCCTGAAGGTCTCACTCATGAACTTCCTACTGCGGATGAATTTCAGAACCTAGTCACTCGAGAAGCTCCAAGCAATGACAATGATGACCTTGACGAACTACGAAAGCAACTTGAAGCAATTAATTCTGCATAG 1284 0.4299 MEIELNDLITDLQSLNQSLPDPSLRDAFHKIQSHVEHIADLVRAQPVRRTKVKDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSIAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQAGMTKTDAALQTLSDINPDVVLESFTLNITTVDGFETFMSSLKNKSFRPDKQGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGIDERTLKREGVCAASLPTTMGVIAGLLVQNTLKFLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNAACLKRQGEYILAKPTRDAAAKAKLEAEGPLIEEGPLHDDNEWNISVVDDCEPDGANTKSSDALPEGLTHELPTADEFQNLVTREAPSNDNDDLDELRKQLEAINSA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3512 427 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 427 IPR045886 -
Mtr3g3512 427 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Mtr3g3512 427 Gene3D - 82 343 - -
Mtr3g3512 427 CDD ThiF_MoeB_HesA_family 64 312 - -
Mtr3g3512 427 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 56 323 IPR035985 GO:0008641
Mtr3g3512 427 PANTHER BNAANNG16230D PROTEIN 1 427 - -
Mtr3g3512 427 Pfam ThiF family 65 319 IPR000594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3512 Mtr-Chr3 48942975 48948336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3512 60 175 EF-hand Containing Proteins AT2G30110 31.092 1.70e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3512 K12164 - gmx:100819760 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3512 3 48942975 48948336 Mtr3g3512 3 48942975 48948336 ECH