Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3496 ATGGCAACAATCAGCAACATTGGCTTACAAGGGAATTGGAATGTGAGCAATGCAAAGAAGGAAAATATGATCAACTCAAGGAAGGTTTTGGAGGTGAATTTTAATTCCTCTCATCAAAACAATGACACATTGAACAACCACAACAAACGAAGATTTTCATTGGTGATTACAAATTCTAATCATGGTAGTACTTTTCATAAAGTGGACACAATTAATGGAACTAAGGTGAATGGTTTACAAGTGGTAGAGGCTCCTAAAAAATTGCTAAATGAAGAAAATACAACAGATGTTGCTCTTGTTACCAATGGGAGATTTGTTGAAGGAAGGTTTGTGTTTAGGCAGATTTTTGTTATTAGGTCCTATGAAATTGGTCCAGATAGAACTGCTACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTCTAAATCATGTTACAAGTTCTGGGATAGGAGGAGATGGATTTGGAGCTACCCGCGAGATGAGCCTAAGGAAACTCATTTGGGTTGTTACTCGTATTCAAGTTCAAGTACAGAGATATAACAAATGGGGAGAAGAAATTGAAATCGATACTTGGGTGGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGATAATCCGAGATCGTTGTACCAAAGAGATCATAACTAAAGCAACAAGCACATGGGTGATAATGAATAGAGAAACAAGAAGACTATCAAAGATACCTGAAGAAGTTAGAAAAGAGCTTACTCCTTTTTACCTTCATAAGATTGCTGTAGCTAGTGAAGAAAGAGATTGTGAAAAGATAGACAAGCTCACTGATGACACTGCTGAGAGAATACAATCTGGTTTGGCTCCAAGGTGGAATGACATGGATGTTAACCAGCATGTGAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAATAAAAGTACTAGAAGATTATAACATGACAAGCTTGACATTAGAGTTTAGGCGTGAATGTACACAATCAGATACATTGGAATCCTTGACTTGTCCAACAGAAAGAGTGATCGGTGAATCCGATAATAATTCAAGCAATAGAAAACCTGATCAGCAATACACACATTTGCTTCGTCTACAAGATGATCAAAAAGATGTTGTTCGAGCTAGATCTGAATGGAATTTAAAGCAAAATCAACAATGA 1164 0.372 MATISNIGLQGNWNVSNAKKENMINSRKVLEVNFNSSHQNNDTLNNHNKRRFSLVITNSNHGSTFHKVDTINGTKVNGLQVVEAPKKLLNEENTTDVALVTNGRFVEGRFVFRQIFVIRSYEIGPDRTATMETLMNFLQETALNHVTSSGIGGDGFGATREMSLRKLIWVVTRIQVQVQRYNKWGEEIEIDTWVDAAGKNGMRRDWIIRDRCTKEIITKATSTWVIMNRETRRLSKIPEEVRKELTPFYLHKIAVASEERDCEKIDKLTDDTAERIQSGLAPRWNDMDVNQHVNNVKYIGWILESVPIKVLEDYNMTSLTLEFRRECTQSDTLESLTCPTERVIGESDNNSSNRKPDQQYTHLLRLQDDQKDVVRARSEWNLKQNQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3496 387 Gene3D Hotdog Thioesterase 103 386 - -
Mtr3g3496 387 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 33 386 IPR045023 GO:0006633|GO:0016297
Mtr3g3496 387 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 278 380 IPR029069 -
Mtr3g3496 387 Pfam Acyl-ACP thioesterase 111 381 IPR002864 GO:0006633|GO:0016790
Mtr3g3496 387 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 33 386 - -
Mtr3g3496 387 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 110 255 IPR029069 -
Mtr3g3496 387 CDD 4HBT 112 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3496 Mtr-Chr3 48834054 48837359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3496 103 383 Acyl Lipid Metabolism Gene Families AT1G08510 55.872 6.81e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3496 K10781 - gmx:100814191 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3496 3 48834054 48837359 Mtr3g3496 3 48834054 48837359 ECH