Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3493 ATGGCTACCGAAGCCCTAGATGATAACAAACCAAAACAAGTCGAAAACGAAGCCAAAGATGAACCCAAACCTAAAGAAGAAGTTGAAGTAACTGAACAAGATGCGGAAGTCGCTGAATCTGACGAGAAGAAAGAGATCGATGGACATGAAGATTCCGACAAAGATGATGAAGATGAAGGTGGAGACGAAGACGATGCTGATGATGATGAGGAGGAAGATGCTGGTGAGGAGAAGAAGGGTGTGAAGAAAGAGTCGTCGGAGAAGAAGAGTCCGGTTACTCCGACGAGTGATAGGCCAACTAGGGAAAGGAAAACGGTGGAGCGGTACTCTGAACCTTCACCTTCGAAGTTTGGAAGGTCTTCTTCCAGTAAAGGACTGATAATTGAAAAGGGACGTGGTACTCAGCTTAAGGATATTCCTAATGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAACCTGCATATGCTCCATAGTTTACTGTTTGGGAAGAAAACAAAGGTTAACAATCTAAAGAGGAATATAGGCCAGTTTTCTGGTTATGTGTGGGCTGAAAATGAGGAAAAACAGAGAACAAGGGTAAAGGAGAGGATCGACAAATGTGTGAAAGAAAAATTGATTGTCTTCTGCGATGTTCTTAATATTCCAATAAACAAGAGTAGTGTGAAGAAGGAGGAACTGTCTGCAAAGCTGTTGGAATTTCTGGAGTCCCCACATGCTACTACTGATGTTCTGCTTGCTGAAAAAGAACAGAAAGGTAAGAAGCGAGTTAGAAAAGCAACCTCTAGCAAAACTCCTGGAGAAACACCTGCAAAGAAGAAAAAGCAGACTTCAGAATCTGGAAAAAAGCGAAAGCCTTCTGATGTTGAAGAGGACGACCAAGCTGAACTTTCTGATGCAAAAGATGAGTCCCAAGAAGATGAAGATGTTGCAGTGGCAAATAATGGAAGTGATAATGAGGTGGGTAAATCAGAGGGAGAGGAAGATACACCAAAGGCTCACAAGAGTACGTCCAAAAAATCTGTGAAGGAGGGTTCAGTTGCCAAAGCTGAAGCTAAATCCACATCTGTTAAGAAGACCTCTGCAAAAGCTGCCAAAAGCAGTGAAAAAACTCCAAAAAAATCAATACCAAAAAAGTCCATTACCGAGCAGGATTCTGCTTCTCTTTCCAAGTCAGATCAACCTGCAACCAAGATACAGAAAACTGGAAAGGAAAAGCAAGATACTAAGGGAAAGGCTGCAAGCAAAACTGCAAAGGCTCCGGTTAAGGATCAAGGTAAAGGTAAAAGTAGCAAGAAGACCAAGGTAGAGCCGAGTAGGCAGGACATGCATGCAGTTGTAGTTGAGATTCTTAAGGAAGTAGATTTCAATAAGGCAACTTTGTGTGATATCCTCCGCCAACTTGGTAAACATTTTGGCCTTGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATCATCACAGATGTAATTAATAATATGTCTGATGAGGAAGATGAAGGTGAGGAAGAAGCTGATAGTGATGGCGATGGGGATGTCGATGCCGGTAAAGATGGCGATGCCAGTGATGAAGTCGATGCCGGTAAAGATGGCGGTGCCAGTGATGAAGATGAAGAGTAA 1623 0.4251 MATEALDDNKPKQVENEAKDEPKPKEEVEVTEQDAEVAESDEKKEIDGHEDSDKDDEDEGGDEDDADDDEEEDAGEEKKGVKKESSEKKSPVTPTSDRPTRERKTVERYSEPSPSKFGRSSSSKGLIIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHSLLFGKKTKVNNLKRNIGQFSGYVWAENEEKQRTRVKERIDKCVKEKLIVFCDVLNIPINKSSVKKEELSAKLLEFLESPHATTDVLLAEKEQKGKKRVRKATSSKTPGETPAKKKKQTSESGKKRKPSDVEEDDQAELSDAKDESQEDEDVAVANNGSDNEVGKSEGEEDTPKAHKSTSKKSVKEGSVAKAEAKSTSVKKTSAKAAKSSEKTPKKSIPKKSITEQDSASLSKSDQPATKIQKTGKEKQDTKGKAASKTAKAPVKDQGKGKSSKKTKVEPSRQDMHAVVVEILKEVDFNKATLCDILRQLGKHFGLDLMHRKAEVKDIITDVINNMSDEEDEGEEEADSDGDGDVDAGKDGDASDEVDAGKDGGASDEDEE* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3493 540 MobiDBLite consensus disorder prediction 51 74 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 382 398 - -
Mtr3g3493 540 SUPERFAMILY DEK C-terminal domain 432 493 - -
Mtr3g3493 540 Gene3D - 431 494 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 248 443 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 75 110 - -
Mtr3g3493 540 PANTHER DEK PROTEIN 3 515 IPR044198 GO:0003677|GO:0006325
Mtr3g3493 540 MobiDBLite consensus disorder prediction 364 381 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 399 414 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 269 292 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 322 348 - -
Mtr3g3493 540 Pfam DEK C terminal domain 439 491 IPR014876 -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 493 512 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 8 50 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 1 132 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 423 443 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 492 540 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 513 530 - -
Mtr3g3493 540 MobiDBLite consensus disorder prediction 293 307 - -
Mtr3g3493 540 PANTHER OS01G0924900 PROTEIN 3 515 - -
Mtr3g3493 540 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3493 Mtr-Chr3 48812529 48818169 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3493 K17046 - gmx:100788998 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3493 3 48812529 48818169 Mtr3g3493 3 48812529 48818169 ECH