Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3487 ATGCATCCTCCGGCGCCGGCGAACTCAGTGCCCGGAAATACTATTGATCCTTCGCTCATCAGAATTTATCGCGCTTGGAAAGGAAATAACGTGTTTTTTCTTGGAGGGAGGTTTATATTTGGACCTGATGTGAAATCTATATTTACAACGCTCTTTCTTGTGATTGCTCCTGTTGCTGTTTTCTGTGCTTTTGTAGCTAGAAAATTCTTTGATGATTTCCCCAATCACTCTGGATATTCAATTTTGATTCTTGTTATTCTTCTCACAATCTTTGTTCTGATTGCTCTTATACTGACCTCAGGAAGAGATCCTGGCATAGTGCCTCGCAATTCTTATCCTCCACTCCCAGATAATTATGATGGAAGTGACAGTAACAACAGTGAACAAAATCCACCACCACATTTACCACGATCCAAGGAAGTAATTGTCAATGGAATAGCTGTGAGAGTAAAATATTGTGATACTTGCATGCTGTATAGACCTCCCCGCTGCTCTCATTGCTCAGTATGTGATAACTGCGTGGAGCGATTTGATCATCACTGCCCATGGGTTGGTCAGTGTATTGGACTGCGCAATTACCGGTTCTACTACATGTTTGTTTTCTCAGCAACCATGCTTTGCCTTTATGTTCATGCCTTTTGCTGGGTTTACATCGTGAGGATCAAGAACTCAGAGGAGATATCGATCTGGAAAGCAATGATCAAAACCCCTGCTTCCATTGCACTAATAATATATTCATTCATTGCTGTCTGGTTTGTTGGAGGACTCACTTGTTTCCATACATATCTAATCAGCACAAACCAGTCTACTTATGAAAATTTTAGATACCGGTATGACCGGCAAGTCAACCCTTATAACAAAGGGGTAATTGAGAACTTCAAAGAAGTATTCTGCTCTTCCATTCCCATATCCAAAAACAGTTTCAGGTCCAAGGTTCCAAGAGAACCAACAGAATCATCTAGACGAAGAGGTGTTGATACCCTTATGATGCCCGTTTACAATGAGGCTGATGAGGTGGAAAAAGATTATAAAGACGAGGAATATGGCAAGAGTAGTGATTTAAGTGATACATCTGTGGATTTAGGCAGTATGCTTCACACAGAAAGGGGACAGAGACAAGTTGCTTCCTTTCTAAGGCAGTCCTTGTGGGAACAAAGCAGCAGAAAATGGGAAACAGCTTCTGATGTTCTTGATGAGGTACACGAAGATGGGGAATCAAAGCGGATCACCAGTGATAGTAGTAATGAACCTGATGGCAACTCAACAAAAACACCTCTATAA 1281 0.4137 MHPPAPANSVPGNTIDPSLIRIYRAWKGNNVFFLGGRFIFGPDVKSIFTTLFLVIAPVAVFCAFVARKFFDDFPNHSGYSILILVILLTIFVLIALILTSGRDPGIVPRNSYPPLPDNYDGSDSNNSEQNPPPHLPRSKEVIVNGIAVRVKYCDTCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATMLCLYVHAFCWVYIVRIKNSEEISIWKAMIKTPASIALIIYSFIAVWFVGGLTCFHTYLISTNQSTYENFRYRYDRQVNPYNKGVIENFKEVFCSSIPISKNSFRSKVPREPTESSRRRGVDTLMMPVYNEADEVEKDYKDEEYGKSSDLSDTSVDLGSMLHTERGQRQVASFLRQSLWEQSSRKWETASDVLDEVHEDGESKRITSDSSNEPDGNSTKTPL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3487 426 ProSiteProfiles DHHC domain profile. 151 201 - -
Mtr3g3487 426 Pfam DHHC palmitoyltransferase 151 275 IPR001594 GO:0016409
Mtr3g3487 426 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 15 416 - -
Mtr3g3487 426 MobiDBLite consensus disorder prediction 118 133 - -
Mtr3g3487 426 MobiDBLite consensus disorder prediction 118 137 - -
Mtr3g3487 426 PANTHER S-ACYLTRANSFERASE 15 416 - -
Mtr3g3487 426 MobiDBLite consensus disorder prediction 391 412 - -
Mtr3g3487 426 MobiDBLite consensus disorder prediction 383 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3487 Mtr-Chr3 48739529 48743346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3487 83 313 Lipid Metabolism Gene Families AT4G22750 28.745 7.36e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3487 - - mtr:MTR_3g098840 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3487 3 48739529 48743346 Mtr3g3487 3 48739529 48743346 ECH