Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3480 ATGGGGTTGCCACAGGTATCTTCAACCTACCTTGCTGAGGAGGTGGCAACTTCAATAGGCACATTTGTGCAATCTACACCTAGGAATAGAATTGCCAGCATAAGCAACTATGAGTTGAAATTGTTGGCCGGAGAAGAAGAACTTGGCAAATGCATGCACATTCATATGCCTAGCTCTGAAAAAACAAATGTTCTAGAGCTTTCAAAAGAATCACCTAATTCAAATATGTGTAAAGATGGTAAGTCCAAGATACAGAAATTGAAGATCGACTCCACGGAACAAATTGGTAGGTTATCTGTCAATGCTGAGCAAACTATGCAGATACCTACTTCTAGAACTGTAGGTTTTCAAATAAGAGCCTCAGCTCCTTGCGTTAATGGTTTTCGTGGAAACAGATATTTGCCAACTGGAGTATCTGAGTCTAACGTCAAAAAGCGATTATTATCACCTTTGAACGTGACATTGTTAGAAGATAATTTTAAAGGCGATCACCTGGACATTGGCAATGAGTTTTATCAAAGGTCTTCAGAGGCTGGTGATGATACTCTACATGCGGATAAGAAGGTTCATATTAGAAACTACAACAATATTCACTCTACACTTTGGTCTTCCTCTTGTTTTCATCAACTTGTAGATTCATCATGTAATGACCCAAACCAAATTTTAACGAGTCACGGCCATTCAAACTGTGAAATTGAGGAGCCAGTATCTTTTAAACATTACAAATCATTTCCTGCATTTAATGATTTGGAGGATTCAACTAAAATGAAGTCACAAACAGAAACGATCTTGAGACTTCAAAATAAGGCGTCATCACCTCGCTTCCCTTTATCTCCTTTGGGTAAAAAAACTTGTACAGATAAAAAATTGGGAGAACGCAGAGATTTTGATACTATGTTGAGTGATGTCAATCTGTTTACTCCTGATAATATCCTTGATATGAATGAGTATTGGACTAGTCCTGCTAGCTTTCCTCCTCGGCATGCAAAGTTATATGGATCGGTGAATAGGTTGCCAATTAGAAGGTCCCTGGTCGGTTCATTTGAGGAGTCACTATTGTCCGGTCGTTTACCGTCTGAGAAAAAAATTGAAGGCTTTCTTGCTATGCTGAATGTAACTGGAGGCAATTTCTCACCTCAATCGCGAAAAGTTCCATTTGCAGTAACAAGTGTGGATGGAGACAAATACCTACTTTATTATTCATCAATTAATCTTTCAGGAAAGTTATTATCAGGCAAGACTAGAGTAACTAAATTTCAGAGAAAACTTAGCATGGATGAGTTGCGATATGTAAAGAGACGTATGCGTATACCTATAAAAGGATGTATTCAACTGGTTCTCAACAATCCAGAGAGTACACCGATTCACACCTTCTTTTGCAATTATGATTTAAGCGATATGCCAGCCGGTACCAAGACGTTTTTGCGGCAAAAGATCACTTTAACCTCGTCTAGATCGATGTCTACAAATGGAAAAGAAATCCAAACAGATTCTGATACTGATGCTAAGTTCTCAAGAAGATGCCTTGTTGATGAAGACTGTGACACATTTCTAAATGGTTCTTCAAAGATCAACAACAATTCTCTCAACAATTGTATCATGCTTTATGCTCTTCACCTTCGCTTTATGTGCCCCTTGCCTAAGAAACATTCAAGGTTTGTTCCTACTCGCAATTCTGACCCTCCACCTTCGGAAGCAAGAAATCTTATGCACAATGAACATGAAAGAAGTTTCTACTTGTATGATGATATGAGAGTAGTGTTTCCTCAGCGTCACTCGGATTCTGATGAGGGCAAGTTGAATGTGGAATATCATTTCCCATCTAATCCGAAATACTTTGACATCAGCAGCTAA 1854 0.3862 MGLPQVSSTYLAEEVATSIGTFVQSTPRNRIASISNYELKLLAGEEELGKCMHIHMPSSEKTNVLELSKESPNSNMCKDGKSKIQKLKIDSTEQIGRLSVNAEQTMQIPTSRTVGFQIRASAPCVNGFRGNRYLPTGVSESNVKKRLLSPLNVTLLEDNFKGDHLDIGNEFYQRSSEAGDDTLHADKKVHIRNYNNIHSTLWSSSCFHQLVDSSCNDPNQILTSHGHSNCEIEEPVSFKHYKSFPAFNDLEDSTKMKSQTETILRLQNKASSPRFPLSPLGKKTCTDKKLGERRDFDTMLSDVNLFTPDNILDMNEYWTSPASFPPRHAKLYGSVNRLPIRRSLVGSFEESLLSGRLPSEKKIEGFLAMLNVTGGNFSPQSRKVPFAVTSVDGDKYLLYYSSINLSGKLLSGKTRVTKFQRKLSMDELRYVKRRMRIPIKGCIQLVLNNPESTPIHTFFCNYDLSDMPAGTKTFLRQKITLTSSRSMSTNGKEIQTDSDTDAKFSRRCLVDEDCDTFLNGSSKINNNSLNNCIMLYALHLRFMCPLPKKHSRFVPTRNSDPPPSEARNLMHNEHERSFYLYDDMRVVFPQRHSDSDEGKLNVEYHFPSNPKYFDISS* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3480 617 Pfam Chromosome segregation during meiosis 536 615 IPR033473 -
Mtr3g3480 617 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 1 304 - -
Mtr3g3480 617 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 327 616 - -
Mtr3g3480 617 PANTHER GH03947P 327 616 - -
Mtr3g3480 617 PANTHER GH03947P 1 304 - -
Mtr3g3480 617 SMART DUF4210_2 344 400 IPR025261 -
Mtr3g3480 617 Pfam Domain of unknown function (DUF4210) 344 385 IPR025261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3480 Mtr-Chr3 48682877 48686366 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3480 - - aprc:113852552 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3480 3 48682877 48686366 Mtr3g3480 3 48682877 48686366 ECH