Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3475 ATGGACCGGAGAAGAACCGAGAGTCCAGTCTACACGCGGCAGTGGAGCGGCAATTCAAGCAGCACCGGATCATCATCGCCGGTGATGTCGCCGGCGCATCCTCAATCACGGCTCGGTCCTACTTCCACCGGTCTCTCCACCATCAAACGCACTCAAAACGTCGCCGCTAAAGCCGCCGCACAGCGTCTCGCTCGTGTCATGGCGTCTCAAACCGTCGACGACGACGACGACGACGACGATCTCGATTTCCGTTACAGTGCTCCGCCTCCTTCCGCTCTTTCCTCTTTCTCCAGTAACAGAAATTCCAGTGCTAATGCTAACTCCATCCCTCCGATTTCCGTTGCGAGACCGAATAGATCTCCTTCTCCTGCGTTAGGTCGGAACTTTGTAGAGCATACTCAATCAGTTCGTTCATCATCAGCTGGAAGACCGGCGGTTTCAGTTCGATCAGCAGCAGCAGCAGCACCGGTGGTGCCGCCTCCGAAATCCACTATACGAACACCTATGGCTGTACCTCCGATAGATCCTCCAACAATTAGGAATAAAGAGAAGAGGTTTCCACCAGACATCACTATCAGGCAACTTAACTCCAAAGACACGGGAGATCAGCGCGAAGCTTCTGCGCTCCGTGATGAACTTGATATGCTACAAGAAGAGAATGATGCTTTATTAGAAAAGCTAAGACTAGCAGAGGAAAAACGCCAAGAAGTGGAGACCCGATCCAGGGAACTTGAGAAACAGGTTGCTTCTCTTGGAGAAGGTGTATCCCTGGAAGCCAAACTGCTGAGCAGGAAAGAAGCTGCTTTGCGTCAAAGAGAGGCTGCTCTCATGGCTGCAAAACAAACACGGAATGAAAGGGATGAGGATCTCACAGCCCTTCGTGTCGAAATTCAGAACCTAAAAGATGACGCTGCAGCAGCAGAGGAACAACGGCAAGAAGCCGAAGCCGAAGCAAAGGCTCTTCGATCAATGACGCAGAGAATGATTTTGACCCAAGAAGAAATGGAGGAAGTGGTCCTGAAGAGATGCTGGCTTGCTCGCTACTGGGGTCTTTCTGTAAAACATGGCATATGTGCAGATATAGCACAGTCCAAGTATGAACATTGGTCTTCTTTAGCTCCTCTTCCTTTTGAACTTGTCATCTCTGCTGGACAAAAGGCTAAGGAGGAATCTTGGAACAAAAGTACTGATGGTTCAGATAGAAGCCAAACTGTTCGTGATATAAATGATCTTGCCGGGGAAGGAAACATAGAGAGTATGCTTTCAGTTGAGATGGGTTTGAGGGAACTTGCTTCTTTGAAGGTTGAGGATGCCGTTGTGCTTGCATTAGCCCAACACAGACGCCCAAATTTGATTCGGCAGTCTGTTTTAGATTCCAAATCACCTGGTGATGCTAAATATTCGGAAGCATTTGAATTAAGTGAAGAGGAAGCCGAAGACGTTCTTTTCAAAGAGGCATGGTTAACTTATTTTTGGAGGAGAGCTTTATTTCATGGTGTGGAGGAAGATATTGCAGAAGACAGGCTTCGGTTTTGGATTGCCCGCAGTGGACAATCACCAACTTCACATGATGCTGTTGATGTTGAGCGAGATTTGTTGGAGTTGAGGAAGCTGGGTATAGAACAGCAACTTTGGGAAGCTTCTCGCAAGGGAATTGATCAGCCTTCAGAGTCAGCACTTGCCAATCATAAGCCTGCCTCCGACTCAGACACATCATCGTGA 1722 0.4855 MDRRRTESPVYTRQWSGNSSSTGSSSPVMSPAHPQSRLGPTSTGLSTIKRTQNVAAKAAAQRLARVMASQTVDDDDDDDDLDFRYSAPPPSALSSFSSNRNSSANANSIPPISVARPNRSPSPALGRNFVEHTQSVRSSSAGRPAVSVRSAAAAAPVVPPPKSTIRTPMAVPPIDPPTIRNKEKRFPPDITIRQLNSKDTGDQREASALRDELDMLQEENDALLEKLRLAEEKRQEVETRSRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALMAAKQTRNERDEDLTALRVEIQNLKDDAAAAEEQRQEAEAEAKALRSMTQRMILTQEEMEEVVLKRCWLARYWGLSVKHGICADIAQSKYEHWSSLAPLPFELVISAGQKAKEESWNKSTDGSDRSQTVRDINDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLIRQSVLDSKSPGDAKYSEAFELSEEEAEDVLFKEAWLTYFWRRALFHGVEEDIAEDRLRFWIARSGQSPTSHDAVDVERDLLELRKLGIEQQLWEASRKGIDQPSESALANHKPASDSDTSS* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3475 573 Coils Coil 206 247 - -
Mtr3g3475 573 MobiDBLite consensus disorder prediction 161 175 - -
Mtr3g3475 573 MobiDBLite consensus disorder prediction 1 126 - -
Mtr3g3475 573 MobiDBLite consensus disorder prediction 548 573 - -
Mtr3g3475 573 MobiDBLite consensus disorder prediction 10 54 - -
Mtr3g3475 573 MobiDBLite consensus disorder prediction 90 115 - -
Mtr3g3475 573 MobiDBLite consensus disorder prediction 157 184 - -
Mtr3g3475 573 Coils Coil 265 327 - -
Mtr3g3475 573 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 555 IPR040321 GO:0000911
Mtr3g3475 573 PANTHER MYOSIN 1 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3475 Mtr-Chr3 48581987 48590412 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3475 1 549 EF-hand Containing Proteins AT5G13260 58.929 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3475 - - gmx:100795139 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3475 3 48581987 48590412 Mtr3g3475 3 48581987 48590412 ECH