Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3474 ATGGCAATGACAATGTCTATTTTATTTCTTCATCTCATTTTTTTTACCATGAAAGTGTTTTGTTTCTCTCCTCATTTTCATGCAGACAAAATTGTTACCCTTCCTGGACAACCACAAAACATAGCCTTTCAACAATTCTCAGGATATGTCACAGTTGATAACAAAAAACACAAGTCACTTTTTTACTACTTTGCTGAATCAGAAACTGATCCTTCTTCAAAACCTCTTGTTCTTTGGCTCAATGGTGGACCTGGTTGTTCTTCTCTTGGAGTAGGTGCATTCTCAGAAAATGGACCCTTTAGACCAAATGGTGATTTTCTTATTAAAAATGAACATAGTTGGAATAAAGAGGCAAACATGCTTTATTTGGAAACACCAGCTGGAGTTGGATTTTCTTATGTTAAAGGTAGTTCTGCTTATACCACAACAGTAAATGACGACGAAACAGCAAGGGACAATCTTGTATTCTTGGAACGTTGGTTCAACAAGTTTCCTCAATATAGAAACAGAGATTTGTTTCTAACTGGTGAAAGTTATGCAGGTCATTATGTTCCTCAACTTGCAAAGCTTATGATTGAAATGAACAAAAGAAACAAGATATTCAACCTTAAAGGCATAGCCTTGGGAAATCCAGTTCTAGAATATGCAACTGATTTCAATTCAAGGGCTGAATTCTTTTGGTCACATGGACTAATATCAGATGCAACTTACAACATGTTCACTAGAGTGTGTAATTACTCTCGTTATGTAAGTGAGTACAATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGATTGGTGAGTAAAGAAACTAGTAGATTTGTGGACAAATATGATGTCACTCTTGATGTTTGCATTTCCTCTGTGCTGTCACAATCCAAGGTTATTTCTCCTCAACCTCAACAAGCAAATGAAATGATAGATGTATGTGTGGATGACAAGGTTACAAACTACTTAAACAGGAGAGATGTGCAAGAGGCACTTCATGCAAAGCTCGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAATGTACTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTGTTGTTGGATCATTGATAAAAGCTGGAGTTAAGGTCCTAATTTACAGTGGAGATCAAGACTCAGTGATTCCACTGACTGGAAGCAGAACCTTAGTTCAAAAATTGGCTAGACAATTAGGACTGAATACAACAGTTCCTTACAGAGTATGGTTTGAAGGCCAACAGGTTGGTGGGTGGACTCAAGTTTATGGCAATGTTCTCTCATTTGCCACAGTGAGAGGTGCTGCACATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTCGTGCTATTCAAATCATTCTTGGAAGGAAGGCCTTTACCTGAAGTTTTCTGA 1395 0.3842 MAMTMSILFLHLIFFTMKVFCFSPHFHADKIVTLPGQPQNIAFQQFSGYVTVDNKKHKSLFYYFAESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGDFLIKNEHSWNKEANMLYLETPAGVGFSYVKGSSAYTTTVNDDETARDNLVFLERWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNKRNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDATYNMFTRVCNYSRYVSEYNRDSVSPLCSKVMGLVSKETSRFVDKYDVTLDVCISSVLSQSKVISPQPQQANEMIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDVLNLEVPTLPVVGSLIKAGVKVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNVLSFATVRGAAHEAPFSQPERSLVLFKSFLEGRPLPEVF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3474 464 Gene3D alpha/beta hydrolase 25 298 IPR029058 -
Mtr3g3474 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Mtr3g3474 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Mtr3g3474 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Mtr3g3474 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Mtr3g3474 464 Gene3D - 358 457 - -
Mtr3g3474 464 Gene3D - 312 348 - -
Mtr3g3474 464 SUPERFAMILY alpha/beta-Hydrolases 31 461 IPR029058 -
Mtr3g3474 464 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Mtr3g3474 464 Pfam Serine carboxypeptidase 35 457 IPR001563 GO:0004185|GO:0006508
Mtr3g3474 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 462 IPR001563 GO:0004185|GO:0006508
Mtr3g3474 464 PANTHER CARBOXYPEPTIDASE 25 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3474 Mtr-Chr3 48572003 48575754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3474 320 460 Calmodulin-binding Proteins AT2G22960 28.369 9.60e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3474 K16297 - gmx:100795668 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3474 3 48572003 48575754 Mtr3g3474 3 48572003 48575754 ECH