Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3460 ATGGCCTTGCAAGTGCAGGCCTCCCTTTACACTACAAGATTATCACCTACTGCCACTCCTACCCTCCTCCGTCCACTCTCCAATCCATCTACTCTCAAGACATCTTTCTTCTCTCGTTCCCTTAACCTTTTACTTCATCCTAATCAACTACAACTTGCTTATGGACCTCCCAGGTTTACCATGCGTGTAGCTTCCAAACAAGCTTATATCTGTCGTGACTGCGGGTATATTTACAATGAGAGGACCGCCTTTGATAAATTGCCTGATAAATATTTCTGTCCTGTTTGTGGTGCTCCCAAACGAAGGTTTAAGCCCTATGCAACAGATGTCAACAAAAAAGCTAATGAAACAGATGTTAGAAAGGCAAGAAAAGCTGAACTCCAAAGAGATGAAGCAGTTGGGAAAGCACTTCCTATTGCAGTTGCCGTGGGAGTTGTAGTTCTTGCAGGATTATACTTCTATCTCAACAGCACATTTTAG 480 0.4313 MALQVQASLYTTRLSPTATPTLLRPLSNPSTLKTSFFSRSLNLLLHPNQLQLAYGPPRFTMRVASKQAYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVNKKANETDVRKARKAELQRDEAVGKALPIAVAVGVVVLAGLYFYLNSTF* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3460 159 CDD rubredoxin 69 106 IPR024935 GO:0005506
Mtr3g3460 159 Pfam Rubredoxin 69 103 IPR024935 GO:0005506
Mtr3g3460 159 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 1 159 - -
Mtr3g3460 159 ProSiteProfiles Rubredoxin-like domain profile. 66 106 IPR024934 GO:0005506
Mtr3g3460 159 SUPERFAMILY Rubredoxin-like 66 110 - -
Mtr3g3460 159 Gene3D - 66 106 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3460 - - gmx:100306219 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3460 3 48427926 48429332 Mtr3g3460 3 48427926 48429332 ECH
Mtr8g3301 8 43476006 43476901 Mtr3g3460 3 48427926 48429332 PCT