Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3415 ATGCAATCCTTTCGCAAAGCTCAAAATGACGATGAACCCGGTTCATCATCAAAGAACCCCCACAAGGCCTCCACTCCCTTCCGTTCCCTCTCTACCTGCAACCGTCATGGTCGAACCTCCTCATCAAATAGGGTGGTTCAACGATCTGCCTCTGCTAGATTGGCACGTCAAAGCACCTCACGTGAACTCATGCTTAATGATATTGTTGGTAATGGAATATCTGGTATCTTGTATAAGTGGGTTAACTACGGTCGTGGATGGCGACCGAGGTGGTTCGTCCTCCATGACGGTGTTCTCTCTTATTATAAAATTCATGGTTCCAATAAGCTCATTCTTAATCGTGACGTTGAACAAAGATCCAAAGTTATTGGCGATGAGTCCATCCGTCGTATCGCTAGCAACCGACATTGTCCTTCCCGCCACCGGAAACCCGTCAGTGAAATCCATCTCATGGTTTGTTCTGTACGCGAGAACAAGTCAGATGAAAGGAGATTTTGTATATGCACGGGGACAAAGAAGAGGTTCCATTTAAGGGCAGAAAGCAAAGAAGACAGAACAATGTGGATGGAGGCAATGATGGCAGCGAAGAACATGTATCCTCGATTACCAACCACTGCAGAGATCACATCTCCTTCAGTTTCGGTTGTGATTTCCACAGACAAGTTGAGGCAACGACTTTTGCAAGAGGGTGTAAATGAGATTGCTATTCGTGAATGTGAAGACATTATGAGAGCTGAGTTATTCCAGTTGCACACTTATATTGTTGCCCTAAAGCAGAAACAATTGTTACTCACTGACACACTCCGTAATTTAGAGACAGAAAAGGTTGACTTGGAGAACACGCTTGTTGAAGACCAAAGACAATTCAAGGATGAAGGGGAGTCTTATCTATCAACACATGAAGAAGATAGTGATGGGAGTGGAAGTGAATATTCTGATGAGCAAGATAGAAATGATGATAACTCCGAAGATGAGAATGATGCATTCTTCGATACATATGAAATTCTAACAACAAGTTCTATTAGAAGTAATGAATCTGAGGAGACATCCAGTAATCCAACTATTGGATCTAACTATCCTCATATCGATCGGCGAAAGAAGTTGCCTGATCCAGTTGGGAAAGAAACTGGAATTAGTTTATGGTCAATAATAAAAGACAATATTGGAAAAGATCTTACAAAAGTTTGTCTTCCAGTTTACTTCAATGAACCAATCTCTTCATTACAGAAATGTTTTGAAGATTTGGAATACTCCCACCTTCTAGATCAGGCGTATGAATGCGGGAAAAAGGGTGACCGTCTAATGAGGATATTATATGTGGCTGCATTTGCAGTTTCAGGGTATGCAAACACTAGTGGTAGAACTTGCAAACCATTTAATCCATTATTGGGTGAAACATATGAGGCAGATTATCCAGATAAAGGTGTACGCTTTATCTCTGAGAAGGTGAGTCATCACCCTATGGTTGTAGCATGTCATTGTGAGGGTCAAGGCTGGAAATTTTGGGGGGATAGTAATTTAAAAAACAAATTTTGGGGTCGCTCAATTCAACTTGATCCTATTGGTATTTTGACCGTGGAGTTTGATGATGGAGAAGTTTTCTATTGGAGTAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAATTGTACTGTGACCATTATGGTACAATGCGGATGGAGGGTAACAGTGAGTATTCATGCAAAATAAAATTCAAGGAGCAATCAATCATTGATAGAAATCCTCACCAGGTTCACGGCACAGTGGAAGATAAGAAAGGAAAAACAATGGCCACTCTATTTGGAAAGTGGGATGAGAGCTTGCATTACATAATTGGAGCTGGAAAAGGAAAAGGGTCCAATGCCTCATCAAAAGGACATATGTTGTGGAAGCAAAACGAAATACCAGAGCAAAAAACAAGATATAACCTAACAGAATTTGCTATTACACTAAATGAAATCACACCTGGTCTTAAGGAGAAGTTGCCACCAACAGATTCAAGGCTAAGGCCTGATCAAAGATGTTTGGAGAATGGAGAATATGAAATGGCAAATTCTGAGAAATTGCGGTTGGAACAAAGACAACGACAGGCACGAAAGATGCAAGAGAAAGGTTGGAAACCAAGGTGGTTTGCCAAAGAAGAAGGGAGTAATAGTTATCGTTATGTTGGTGGATATTGGGAGACTAGAGAAAAGGGAAAATGGGAATCTAGTCCTGATATTTTTGGTCAATTTTCTGCTGATCCTGATCAAGAATCTAACTTAACTCCATGA 2277 0.4071 MQSFRKAQNDDEPGSSSKNPHKASTPFRSLSTCNRHGRTSSSNRVVQRSASARLARQSTSRELMLNDIVGNGISGILYKWVNYGRGWRPRWFVLHDGVLSYYKIHGSNKLILNRDVEQRSKVIGDESIRRIASNRHCPSRHRKPVSEIHLMVCSVRENKSDERRFCICTGTKKRFHLRAESKEDRTMWMEAMMAAKNMYPRLPTTAEITSPSVSVVISTDKLRQRLLQEGVNEIAIRECEDIMRAELFQLHTYIVALKQKQLLLTDTLRNLETEKVDLENTLVEDQRQFKDEGESYLSTHEEDSDGSGSEYSDEQDRNDDNSEDENDAFFDTYEILTTSSIRSNESEETSSNPTIGSNYPHIDRRKKLPDPVGKETGISLWSIIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSHLLDQAYECGKKGDRLMRILYVAAFAVSGYANTSGRTCKPFNPLLGETYEADYPDKGVRFISEKVSHHPMVVACHCEGQGWKFWGDSNLKNKFWGRSIQLDPIGILTVEFDDGEVFYWSKVTTSIYNLILGKLYCDHYGTMRMEGNSEYSCKIKFKEQSIIDRNPHQVHGTVEDKKGKTMATLFGKWDESLHYIIGAGKGKGSNASSKGHMLWKQNEIPEQKTRYNLTEFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQEKGWKPRWFAKEEGSNSYRYVGGYWETREKGKWESSPDIFGQFSADPDQESNLTP* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3415 758 Gene3D - 71 199 IPR011993 -
Mtr3g3415 758 Coils Coil 682 705 - -
Mtr3g3415 758 MobiDBLite consensus disorder prediction 340 358 - -
Mtr3g3415 758 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 15 748 IPR000648 GO:0008289
Mtr3g3415 758 MobiDBLite consensus disorder prediction 18 53 - -
Mtr3g3415 758 Pfam Oxysterol-binding protein 379 732 IPR000648 GO:0008289
Mtr3g3415 758 SUPERFAMILY Oxysterol-binding protein-like 375 745 IPR037239 -
Mtr3g3415 758 SUPERFAMILY PH domain-like 73 212 - -
Mtr3g3415 758 SMART PH_update 71 199 IPR001849 -
Mtr3g3415 758 Coils Coil 268 288 - -
Mtr3g3415 758 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 15 748 - -
Mtr3g3415 758 MobiDBLite consensus disorder prediction 287 315 - -
Mtr3g3415 758 ProSiteProfiles PH domain profile. 70 197 IPR001849 -
Mtr3g3415 758 Gene3D - 465 646 - -
Mtr3g3415 758 MobiDBLite consensus disorder prediction 1 53 - -
Mtr3g3415 758 Gene3D - 674 743 - -
Mtr3g3415 758 MobiDBLite consensus disorder prediction 340 368 - -
Mtr3g3415 758 MobiDBLite consensus disorder prediction 734 758 - -
Mtr3g3415 758 Pfam Pleckstrin homology domain 78 193 - -
Mtr3g3415 758 MobiDBLite consensus disorder prediction 287 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3415 Mtr-Chr3 48048542 48052916 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3415 K20456 - gmx:100781218 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3415 3 48048542 48052916 Mtr3g3415 3 48048542 48052916 ECH