Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3412 ATGAGTTCAAATAATAATTCTTCAAAGATTGAATTATTGGTTTGGTTTTCTCAATTCATGGGAGGTCTTTGTTCAAGGTCCTCCCAAGATGTTGACCGTGTCTTCGCCAATTCCTCCGATGCCGATGCCGATTCCGATCATAATAAGCCTAACCCCACCACTCCTCCTCACCCACCCCAAACCATGGACAGAAATAATAATCCTCCCGGACAACTTTTCTACGACGGAATCCCACTCTACGCCGATAAGCCTAGGGCTAAACAACCTACTACTGTTGCTAAAGTCTCAGAGGTGAGTTCGCGCATTGGACGAGCTGGATTGGGGAAGGCGGTGGAGGTTTTGGACAATCTTGGGAGCAGCATGGCAAATTTAAATGCTGGCAGTGGGTTTGTTTCTGGATCTGCAATAAAGGGGAGTGAAATTTCCATCTTAGCATTCGAGGTTGCAAACACTATTGTCAAAGGTTTTCATCTACTGGAATCTCTTTCCACAAAAAGTATTAGGCATCTAAAAGAAGAGGTGCTTCTTTCAGAGACTGTGCATGATTTAGTGTCAAAGGATAAGGATGAACTTCTTACGATTGTTGCTGCAGATAAAAGGCAGGAGTTGAAAGTTTTTTCCGACGAGGTGATTCGTTTTGGAAATCGTTCAAAGGATCCTCAATGGCACAACTTAGACCGTTACTTTGAGAAGATTAGCAAAGAGTCAAGTGCTCAAAGACTCTCAAGAGACGAGGCAGAATCAATGATGAAACAATTGATGACTTCAGTCCAATTTACAGCTGAGCTGTACCACGAACTTCATGCATTGGACAGATTTGAACAAGACATTGAGCATAAGGGTGAAGAGGAGGATCAAAGAGGTGATAGCCTTGCATTCTTGAGAGCAGAAATTAAAAGTCAAAGGAAGCAAATTAAACATTTAAAGAAAAAATCACTATGGTGTAGAAGTTTGGAGGAGGTTATTGAGAAGCTTGTAGACATTGTACATTTTTTACATTTGGAGATAAGCAATAACTTTGGGAGTGCAGATGGCGAAAAGCCAATAATTGGAAACATTGGCAATCGCCAAAGATTGGGCCCTGCTGGTCTTGCTTTGCATTATGCAAATATAGTGCTTCAAATTGATACTCTTGTAGCCAGGTCTATTTCTATGCCTGCAAATACAAGGGATACATTGTATCAAAACTTGCCCCCTAATATAAAATTAGCTCTACGTTCCAAATTGCCATCCTTTCATGTTGTAGAAGAGCTCACTGTAGCGGATATCAAAGATGAGATGGAGAAAACATTACATTGGTTGGTTCCAATTGCCACAAACACATCCAAAGCACATCATGGCTTTGGCTGGGTAGGGGAGTGGGCGAACACAGGCTCCGAGGGGAATAAGAAAGTTTTCCAAGGTGGTGCAATGCGGATTGAGACATTCCACTATGCTGATAAAGACAAAGTAGAACATTATATTCTTGAACTTCTCTTATGGCTTCACCGCTTGGCCATCAAAAGCAAGGCTGGCAGTAATGCTGGCAAAGTGAAGTCTGCCATCAAGCCCTCTGTTGGGGCTACCTTAGAAGAGACAAATAATCAGTCTCCAAATGCACTGTCATCATTTTTAACAATCGATGAGCGAAACATGCTGCAGGATGTAAGTAGGAAACCAAAGATGAAAGGAAATAGTAAAAGCTTGGACTTTGACAGTCTGAAGCCTACATTGAGTGAGAAATGCAGACTGACCAAGAGTAGCAGTCTTTCATCAAGTAAAAGCAAGGGATTATCTTTTAATAGGATTTTGTCAAAGCTTCCTGTGATTGATTTTGATATTGACAAAGAACGAGCATTGAACGTGATCGACAGACTAGATGTGGTCAGATAA 1872 0.4151 MSSNNNSSKIELLVWFSQFMGGLCSRSSQDVDRVFANSSDADADSDHNKPNPTTPPHPPQTMDRNNNPPGQLFYDGIPLYADKPRAKQPTTVAKVSEVSSRIGRAGLGKAVEVLDNLGSSMANLNAGSGFVSGSAIKGSEISILAFEVANTIVKGFHLLESLSTKSIRHLKEEVLLSETVHDLVSKDKDELLTIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLDRYFEKISKESSAQRLSRDEAESMMKQLMTSVQFTAELYHELHALDRFEQDIEHKGEEEDQRGDSLAFLRAEIKSQRKQIKHLKKKSLWCRSLEEVIEKLVDIVHFLHLEISNNFGSADGEKPIIGNIGNRQRLGPAGLALHYANIVLQIDTLVARSISMPANTRDTLYQNLPPNIKLALRSKLPSFHVVEELTVADIKDEMEKTLHWLVPIATNTSKAHHGFGWVGEWANTGSEGNKKVFQGGAMRIETFHYADKDKVEHYILELLLWLHRLAIKSKAGSNAGKVKSAIKPSVGATLEETNNQSPNALSSFLTIDERNMLQDVSRKPKMKGNSKSLDFDSLKPTLSEKCRLTKSSSLSSSKSKGLSFNRILSKLPVIDFDIDKERALNVIDRLDVVR* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3412 623 Pfam Protein of unknown function (DUF668) 358 442 IPR007700 GO:0045927
Mtr3g3412 623 MobiDBLite consensus disorder prediction 37 69 - -
Mtr3g3412 623 Pfam Domain of unknown function (DUF3475) 143 199 IPR021864 GO:0045927
Mtr3g3412 623 PANTHER DUF668 FAMILY PROTEIN 13 623 - -
Mtr3g3412 623 Coils Coil 291 311 - -
Mtr3g3412 623 PANTHER OS01G0873900 PROTEIN 13 623 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3412 Mtr-Chr3 48014274 48023292 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3412 - - gmx:100779607 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3412 3 48014274 48023292 Mtr3g3412 3 48014274 48023292 ECH
Mtr8g3335 8 43887466 43895089 Mtr3g3412 3 48014274 48023292 PCT