Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3393 ATGGAAAAATGGGTGTGTTTGATGATGATGTTGGTAGCAATATTGGAATTAAGTTTTGGAGTCAAAGGTGCAGAAGAGGTAACATATGATGGAAGATCTCTTATCATCAATGGACAAAGAAATATTCTCTTCTCTGGTTCTATTCATTACCCCCGTAGCACCCCTCAGATGTGGCCAGGTTTGATAGCGAAAGCAAAACAAGGAGGATTGGATGTTATTCAAACTTATGTGTTTTGGAATCTACATGAACCCCAACCCGGCAAGTATGATTTCAGCGGCAGAAATGACTTGGTGGGATTCATAAAGGAAATCCATGCTCAAGGATTGTACGTTTCCCTCAGGATTGGACCTTTCATCGAGAGTGAATGGAATTACGGGGGATTCCCATTTTGGCTACATGATGTCCCTGGTATTGTCTACCGAACAGACAATGAGCCATTCAAGTTCTACATGCAAAATTTTACAACAAAAATCGTGAACATGATGAAAGAAGAGGGTTTATATGCTTCGCAAGGAGGCCCAATTATATTGTCACAGATTGAGAATGAATATGGAAATATCCAAAAGGCATTTGGAACTGCAGGATCGCAGTATGTTGAATGGGCTGCAAAAATGGCAGTGGGTCTTAATACAGGCGTACCATGGGTTATGTGCAAGCAACCCGATGCTCCTGATCCTGTGATCAATACATGCAATGGCATGAGATGTGGAGAAACTTTTACTGGACCAAACTCCCCCAATAAGCCTGCCATGTGGACAGAGAATTGGACATCTTTCTATCAAGTATACGGTGGAGTGCCATATATACGCTCTGCTGAAGACATTGCATTTCATGTCACTCTTTTTGTTGCAAGAAATGGAAGCTTTGTCAACTACTATATGTATCATGGTGGAACTAACTTTGGGAGAACAAGCTCTGCTTATATGATAACAGGCTATTATGATCAAGCACCACTTGATGAATATGGTTTATTCAGGCAACCTAAGTGGGGACATCTCAAGGAGTTGCATGCTGCAATCAAGTCTTGTTCCACCACTTTATTACAAGGAGTGCAAAGAAACTTTTCTTTAGGTGAACTTCAAGAGGGTTATGTTTTTGAAGAAGAAAATGGAAAATGTGCTGCATTTCTTATAAACAATGATAAAGGGAACACTGTTACAGTCCAATTCAACAATAGTTCGTACAAGTTGCTCCCAAAGTCTATAAGTATCTTACCAGATTGTCAAAATGTGGCTTTCAATACCGCACATTTAAATACAACGAGCAACAGAAGGATCATAACTTCAAGACAAAACTTCAGCTCAGTTGATGATTGGAAACAATTCCAAGATGTCATTCCAAACTTTGATGACACTTCACTAAGATCAGACTCATTACTTGAGCAAATGAATACAACCAAAGACAAATCTGATTACCTTTGGTATACTCTTAGGCTTGAAAATAATTTATCTTGCAACGATCCAATACTCCATGTTCAATCTTCTGCTCATGTTGCCTATGCTTTTGTGAACAATACATACATTGGAGGGGAACACGGAAATCATGATGTGAAGTCATTTACATTAGAGCTCCCAATTACATTAAACGAAAGAACGAACAATATTTCTATTCTCAGCGGTATGGTTGGACTTCCGGATTCAGGGGCATTTCTTGAAAAAAGATTTGCTGGTTTAAACAATGTGGAACTTCAGTGCAGTGAACAAGAGTCTCTTAATTTGAACAATTCTACATGGGGATATCAGGTTGGATTACTTGGAGAGCAATTAAAAGTATATACAGAACAAAATAGCACAGACATTAAATGGACTCAATTGGGGAATATCACGATTGATGAAGTTACTCTCACTTGGTACAAGACTACATTTGACACACCCAAGGGAGATGACCCCATTGCCTTAGACCTTAGCTCAATGGCAAAAGGTGAAGCTTGGGTAAATGGACAAAGCATTGGTCGCTATTGGATTTTGTTTCTTGATTCCAAAGGCAATCCTTCACAATCATTGTATCATGTTCCTCGGTCTTTCCTTAAAGATAGTGAAAACAGTTTGGTATTGCTGGATGAAGGTGGTGGGAACCCTCTTGATATCTCCTTGAACACTGTTTCAGTCACAGATTTACAAGATAACTTTTCTAAATTGCCATTCCCTACCTATACTTAA 2160 0.3912 MEKWVCLMMMLVAILELSFGVKGAEEVTYDGRSLIINGQRNILFSGSIHYPRSTPQMWPGLIAKAKQGGLDVIQTYVFWNLHEPQPGKYDFSGRNDLVGFIKEIHAQGLYVSLRIGPFIESEWNYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKEEGLYASQGGPIILSQIENEYGNIQKAFGTAGSQYVEWAAKMAVGLNTGVPWVMCKQPDAPDPVINTCNGMRCGETFTGPNSPNKPAMWTENWTSFYQVYGGVPYIRSAEDIAFHVTLFVARNGSFVNYYMYHGGTNFGRTSSAYMITGYYDQAPLDEYGLFRQPKWGHLKELHAAIKSCSTTLLQGVQRNFSLGELQEGYVFEEENGKCAAFLINNDKGNTVTVQFNNSSYKLLPKSISILPDCQNVAFNTAHLNTTSNRRIITSRQNFSSVDDWKQFQDVIPNFDDTSLRSDSLLEQMNTTKDKSDYLWYTLRLENNLSCNDPILHVQSSAHVAYAFVNNTYIGGEHGNHDVKSFTLELPITLNERTNNISILSGMVGLPDSGAFLEKRFAGLNNVELQCSEQESLNLNNSTWGYQVGLLGEQLKVYTEQNSTDIKWTQLGNITIDEVTLTWYKTTFDTPKGDDPIALDLSSMAKGEAWVNGQSIGRYWILFLDSKGNPSQSLYHVPRSFLKDSENSLVLLDEGGGNPLDISLNTVSVTDLQDNFSKLPFPTYT* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3393 719 SUPERFAMILY Galactose-binding domain-like 402 558 IPR008979 -
Mtr3g3393 719 Gene3D Glycosidases 24 344 - -
Mtr3g3393 719 PANTHER BETA-GALACTOSIDASE RELATED 24 712 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 SUPERFAMILY Galactose-binding domain-like 577 703 IPR008979 -
Mtr3g3393 719 Pfam Beta-galactosidase jelly roll domain 613 685 IPR025300 -
Mtr3g3393 719 PANTHER BETA-GALACTOSIDASE 6 24 712 - -
Mtr3g3393 719 Pfam Glycosyl hydrolases family 35 33 339 IPR031330 -
Mtr3g3393 719 Gene3D - 574 710 - -
Mtr3g3393 719 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Mtr3g3393 719 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Mtr3g3393 719 SUPERFAMILY (Trans)glycosidases 25 343 IPR017853 -
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 613 627 IPR001944 GO:0004553|GO:0005975
Mtr3g3393 719 PRINTS Glycosyl hydrolase family 35 signature 640 656 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3393 Mtr-Chr3 47801120 47806575 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3393 5 704 Glycoside Hydrolase AT5G63800 63.571 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3393 - - gmx:100818637 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3393 3 47801120 47806575 Mtr3g3393 3 47801120 47806575 ECH