Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3388 ATGGTAGAACACTCTTCCGGAACCAACCTTAGCTACCGTGGAGATATTGTTGGCATGGAGGGGGGTACATCTTTACAAGATGACTCCAAATACTATGACGATGATGGCCGTGTTAAACGGACAGGAACCATTTGGACTACATGCTCCCACATAATAACAGCTGTGATAGGATCTGGGGTGCTCTCCTTAGCCTGGTCTATAGCTCAGATGGGTTGGGTTGCTGGTCCTGGAGCCATGATATTTTTCAGCATCATCACTCTGTATACTTCATCATTTCTCGCTGATTGTTATCGTTGTGGTGACACCGAATTTGGAAAGAGAAACTATACTTTCATGGATGCAGTTAGTAACATTCTTGGCGGGCCCAGTGTTAAGATTTGTGGGATAGTTCAGTATTTGAATCTTTTCGGAAGTGCAATAGGGTACAATATTGCAGCTGCCATGAGCATGATGGAAATCAAAAAGTCTTTATGTGTCCATACATCTGATGGAAAAGACGCATGTCATATTTCAGGCAACCCATACATGATTGCTTTTGGCGTGGCACAACTTTTCCTTTCTCAAATTCCAGATTTTCATAACATGTGGTGGCTCTCAATAGTTGCTGCAGTCATGTCTTTCTTCTACTCCACAATTGCTCTTGCTCTTGGAATTTCCAAAGTTGCAGAAAACGGTACTGTTATGGGTAGCCTCACAGGAGTAAGCGTCGGAACAGTGACCCCGGCCCAAAAAGTATGGGTTTTCCAAGGTCTTGGAAACATCGCCTTTGCTTATTCATATTCTTTTGTTCTCCTGGAAATTCAGGACACAATCAAATCTCCACCATCAGAAGGAAAAGCAATGAAGATAGCTGCGAAGATAAGTATTGCAGTAACTACAACATTTTATTTGCTCTGTGGCTGCATGGGATATGCTGCTTTTGGAGACAATGCGCCAGGCAACCTGCTCGCCGGATTTGGTGTCTCAAAAGCATATTGGGTTGTAGATGCTGCCAATGCTGCTATCGTTATTCACCTTTTTGGAGCATACCAAGTGTATGCCCAACCCCTATTTGCTTTCGTCGAGAAAGAGGCAGCAAAAAAATGGCCCAAAATTGACAGAGAATTCAAAGTTAAAATCCCTGGTTTGCCAGTCTACAGTCAAAACATATTTTCGTTAGTTTGGAGGACAGTGTTTGTTATCATCTCCACTCTCATCGCAATGTTGATTCCATTTTTCAACGACGTTTTGGGAGTGATTGGGGCATTGGGATTTTGGCCTTTAACTGTTTACTTTCCTGTGGAGATGTATATCGTACAAATGAAGATCCCAAAATGGAGTAGGAAGTGGATTATTCTGGAAATAATGAGTACTTTCTGCCTCATTGTATCTATTGTGGCTGGTCTTGGCTCATTGGTCGGTGTCTGGATCGACCTGCAGAAATACAAACCATTCAGCTTATCGAATTAA 1449 0.4258 MVEHSSGTNLSYRGDIVGMEGGTSLQDDSKYYDDDGRVKRTGTIWTTCSHIITAVIGSGVLSLAWSIAQMGWVAGPGAMIFFSIITLYTSSFLADCYRCGDTEFGKRNYTFMDAVSNILGGPSVKICGIVQYLNLFGSAIGYNIAAAMSMMEIKKSLCVHTSDGKDACHISGNPYMIAFGVAQLFLSQIPDFHNMWWLSIVAAVMSFFYSTIALALGISKVAENGTVMGSLTGVSVGTVTPAQKVWVFQGLGNIAFAYSYSFVLLEIQDTIKSPPSEGKAMKIAAKISIAVTTTFYLLCGCMGYAAFGDNAPGNLLAGFGVSKAYWVVDAANAAIVIHLFGAYQVYAQPLFAFVEKEAAKKWPKIDREFKVKIPGLPVYSQNIFSLVWRTVFVIISTLIAMLIPFFNDVLGVIGALGFWPLTVYFPVEMYIVQMKIPKWSRKWIILEIMSTFCLIVSIVAGLGSLVGVWIDLQKYKPFSLSN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3388 482 PANTHER OS05G0424000 PROTEIN-RELATED 5 476 - -
Mtr3g3388 482 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 5 476 - -
Mtr3g3388 482 Pfam Transmembrane amino acid transporter protein 40 468 IPR013057 -
Mtr3g3388 482 Coils Coil 478 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3388 Mtr-Chr3 47767158 47772835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3388 26 478 Organic Solute Cotransporters AT5G09220 65.066 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3388 K24917 - gmx:100817699 743.806