Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3386 ATGTTGGAAGAAGAAATTGTAAGAAACCGGAGCCATTCCATAGATGGTATCCCTTCACAACTTGATCCTGAATACTTCGATGACGATGGTCGTCCTAAACGAACAGGAACAATATGGACAACAAGCTCTCATATAATAACAGCTGTGATTGGGTCTGGGGTGCTATCCTTAGCATGGGCTACTGCACAATTGGGTTGGATTGGTGGTCCTTTGGCGATGATTCTTTTCAGCCTCATCACTTTGTATACTTCATCAATGCTAGCTGAATGTTATCGTTGTGGAGATCCTGTGTATGGAAAGAGAAGCTATACTTTTGTGGATGCAGTTCGTAGCATTCTTGGCGGGCGCCAATACACGGTTTGTGGAATAGTTCAGTACATGTATCTTTATGGCAGTGCAATAGGATACTCGATTGCAGCTCCCATCAGCATGATGGAAATAAAAAAGTCTAGATGTCTCCATTTATCAGGAGGAAAAGATCCATGTCACATTTCAAGCAACCCATACATGATCGGTTTTGGAGTAATCGAAATTTTCGTTTCTCAAATTCCAGAGTTTCATAATACGTGGTGGCTCTCAGTAATAGCTGCAATAATGTCTTTTGGCTATTCCACAATTGGCGTCTTTTTAGCAATTTCTCAAACAGCAGAAAATGGTACCTTCAAGGGTACTCTCACTGGAGGAAGCACTGAAAATGTGTCAACAACAACAGAAGTGTGGGGAATTTTCCAAGCTCTTGGTGACATAGCCTTTGCTTATTCATACTCTCAAATTCTCATTGAAATTCAGGACACCATAAAAAGTCCACCATCCGAAATAAAAACGATGAAGAATGCAGCAGCTTTAAGTGTTGCTGTCACTACAGCATTTTATTTGCTTTGTGGCTGCATGGGCTATGCTGCATTCGGAGAACAAGCACCAGGGAACTTGCTCACTGGATTTAGTATGTACAATCCAGCCTGGCTCATCGATTTTGCGAATGCTGCCGTCGTAATCCACCTTGTGGGAGCATACCAAGTATATGTTCAACCTGTCTTTGCCTTCGTAGAGAAAGGAGCAGCAAAAAGATGGCCCCAAACAAAAGTGGAACACAAAATTCCAATCCCGGGTTTTCGTCCTTACAATCTAAATCTATTTAGATTAGTTTGGAGAACAGCATTTATGATCCTAACTACTTTTGTTGCAATGTTGATTCCTTTTTTTAATGATGTTCTGGGATTTCTTGGAGCAGTGGGATTTTGGCCTTTGACAGTTTATTATCCAGTGGAGATGTATATCTTGCAAAGGAAGATCCCAAAATGGAGTCCTAAATGGATTTTGTTGCAAATCATAAGTGTTATATGCTTTATTGTATCGGGTGCGGCTGCTCTTGGCTCAACCGCCAGTATTATAGAGGACCTAAAGCATTACAAGCCATTCAGCTCAGAGTATTGA 1434 0.4121 MLEEEIVRNRSHSIDGIPSQLDPEYFDDDGRPKRTGTIWTTSSHIITAVIGSGVLSLAWATAQLGWIGGPLAMILFSLITLYTSSMLAECYRCGDPVYGKRSYTFVDAVRSILGGRQYTVCGIVQYMYLYGSAIGYSIAAPISMMEIKKSRCLHLSGGKDPCHISSNPYMIGFGVIEIFVSQIPEFHNTWWLSVIAAIMSFGYSTIGVFLAISQTAENGTFKGTLTGGSTENVSTTTEVWGIFQALGDIAFAYSYSQILIEIQDTIKSPPSEIKTMKNAAALSVAVTTAFYLLCGCMGYAAFGEQAPGNLLTGFSMYNPAWLIDFANAAVVIHLVGAYQVYVQPVFAFVEKGAAKRWPQTKVEHKIPIPGFRPYNLNLFRLVWRTAFMILTTFVAMLIPFFNDVLGFLGAVGFWPLTVYYPVEMYILQRKIPKWSPKWILLQIISVICFIVSGAAALGSTASIIEDLKHYKPFSSEY* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3386 477 Pfam Transmembrane amino acid transporter protein 34 464 IPR013057 -
Mtr3g3386 477 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 471 - -
Mtr3g3386 477 PANTHER OS05G0424000 PROTEIN-RELATED 11 471 - -
Mtr3g3386 477 Gene3D Amino acid/polyamine transporter I 31 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3386 Mtr-Chr3 47750256 47753388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3386 13 477 Organic Solute Cotransporters AT5G09220 63.966 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3386 K24917 - gmx:100816507 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3386 3 47750256 47753388 Mtr3g3386 3 47750256 47753388 ECH