Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3370 ATGCAAATGGCTCTCCTAATGAACTCAAGTACTTCAACTCATGTACTTTACCCTGCATTAAAAACAGAGGAACCCAAAACAGAAAACATGGTTTCTATTTTTGATTCAAATTTGCTTCAAAATCAAGTGAACATGCCAAAAGAGTTCATTTGGCCATCTATGGATTTAGTTAACACAGCCCAAGAGGAGCTAAAAGAACCTCTCATAGACTTAAGTGTCATGAAAAGTGGTGATGAAGAAGCTATTGCAAGTGCTGCTGAGCTTGTGAGGAAAGCATGTTTGAAACATGGTTTCTTCCAAGTGATTAATCATGGTGTGGACCAAGAACTCATCAATGATGCATATTGTGAAGTTGACCCCATTTTCAACCTACCTATCAACAAGAAGCTAAGTGCTAAGAGGGTGCATGGTGGTGTCTCTGGCTACTCAGGTGCTCATGCAGATAGATATTCTTCCAAGTTACCATGGAAAGAGACATTTTCTTTTGTATACAATCACCAAAATGATTCCAATTCTCAGATTGTTAACTACTTCAAGTCTGTCTTAGGAGAAGACTTTCAACAGACAGGATGGGTGTATCAAAAGTACTGTGAAGCAATGAAAGAATTATCTTTAGTGATTATGGAGCTCTTGGCCATTAGTTTGGGGATAGATCGTTTGCATTATCGAAGATTTTTTGAAGATGGTGACTCAATAATGAGATGTAACTATTATCCACCTTGTAAAAGTTCTAATCTCACACTTGGTACTGGCCCTCACTCAGACCCAACATCACTAACCATTCTTCATCAAGATCAAGTTGGAGGTCTTGAAGTTTTTGCAGATAATAAATGGGTGGCTGTTCGCCCTAGACCTGAAGCCCTAGTCATTAACATAGGTGACACTTTCATGGCGTTATCAAATGGAAGATACAAGAGTTGCCTCCACAGGGCATTAGTGAACAGATACAGAGAAAGAAGGTCACTGGTTTTCTTTGTGTGTCCAAGAGAAGACAAAGTGGTGAGACCCCCAGAAAATTTGTTAAGCAAAAATGAGGCAAGAAAGTACCCTGATTTTACATGGTCAAGTTTGTTTGAATTTACACAAAAACACTACAGAGCTGATGTTGCTACGCTCCAAAGCTTCTTTCAGTGGCATTCCTCTTGCAACTTATAA 1155 0.3913 MQMALLMNSSTSTHVLYPALKTEEPKTENMVSIFDSNLLQNQVNMPKEFIWPSMDLVNTAQEELKEPLIDLSVMKSGDEEAIASAAELVRKACLKHGFFQVINHGVDQELINDAYCEVDPIFNLPINKKLSAKRVHGGVSGYSGAHADRYSSKLPWKETFSFVYNHQNDSNSQIVNYFKSVLGEDFQQTGWVYQKYCEAMKELSLVIMELLAISLGIDRLHYRRFFEDGDSIMRCNYYPPCKSSNLTLGTGPHSDPTSLTILHQDQVGGLEVFADNKWVAVRPRPEALVINIGDTFMALSNGRYKSCLHRALVNRYRERRSLVFFVCPREDKVVRPPENLLSKNEARKYPDFTWSSLFEFTQKHYRADVATLQSFFQWHSSCNL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3370 384 Pfam 2OG-Fe(II) oxygenase superfamily 230 328 IPR044861 -
Mtr3g3370 384 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 328 IPR005123 -
Mtr3g3370 384 PRINTS Isopenicillin N synthase signature 89 106 - -
Mtr3g3370 384 PRINTS Isopenicillin N synthase signature 253 274 - -
Mtr3g3370 384 PRINTS Isopenicillin N synthase signature 288 314 - -
Mtr3g3370 384 Pfam non-haem dioxygenase in morphine synthesis N-terminal 67 171 IPR026992 -
Mtr3g3370 384 SUPERFAMILY Clavaminate synthase-like 38 367 - -
Mtr3g3370 384 Gene3D - 28 360 IPR027443 -
Mtr3g3370 384 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 381 - -
Mtr3g3370 384 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 23 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3370 Mtr-Chr3 47574429 47577285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3370 45 366 Glycosyltransferase AT5G59530 30.060 6.39e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3370 K05282 - gmx:100816834 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3370 3 47574429 47577285 Mtr3g3370 3 47574429 47577285 ECH