Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3363 ATGAGCATGAACACGATGATCAGAAAATCTACCACCATTCTCACCTACTTCAAATCCAACTACAACAACTTCTTCTCAACTTCCACTCGTCGGAAACCTAATCTCACCAACCACCACCCACGCCGCTTTAACTCCACCACATCTCCTAACCCCATTCACGATCAGGTAATTGATTTTCCTGGAGGAAATCTCAAATTCATCCCTCAAATGACATTTTTATCTGAATCACAACAACACAGAGTTCCTTGTTACCGTGTTCTTGATGATAATGGTGAACCAATTTTTGGGACTGATTTTGTTCAGGTGAGTGAGGATTTTGCTGTTAAAATGTACAATAACATGGTTGCATTACAAACAATGGACACTATCTTCTATGAAGCACAAAGACAAGGCAGAATCTCATTTTATGTAACAACAAATGGAGAAGAAGCTATCAACATTGCATCAGCTGCTGCTCTTTCCATGAATGATGTTATTTTCCCGCAGTATAGGGAACAAGGAGTCTTGTTATGGCGTGGTTTCACTCTGCAAGAATTCGCAAATCAGTGTTTTTCAAATAAGTTTGACAATGGGAAAGGAAGGCAGATGCCAGCCCATTATGGGTCCAACAAGCACAATTACATGAATGTAGCTTCAACTGTTGCTACGCAAATTCCCCATGCTGTTGGAGCTGCATATTCCTTAAAGATGGACAAAAAGGATGCATGTGCCGTAACATATTTCGGAGATGGTGGTTCAAGTGAGGGAGATTTCCATGCCGGATTAAATTTTGCAGCAGTAATGGAGGCCCCAGTTATTTTTATATGCCGGAATAATGGATGGGCTATAAGTACCCCTACATCAGATCAGTTTCGAAGTGATGGTATTGTTGTGAAAGGACAGGCTTATGGAGTCCGTAGCATTCGTGTAGATGGGAATGATGCTCTGGCCATTTATAGTGCTGTTCAAGCTGCTCGTCAAATGGCAGTTAGCGAAGAGAGACCAATTCTAATAGAAGCTCTTACATATAGAGTAGGACACCACTCCACATCAGATGACTCTACCAAGTATCGTCCCGCCAACGAGATTGAATGGTGGAGATTGTCACGTGATCCCGTAGCGAGATTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGACATGGCTGAGTCTGAGCTTAGGAACAGTTTGAGACAGCAGCTTCTACAGACCATTCAAGTTGCTGAGAGTGTAGAAAAACCTCCACTTGCAGACATGTTTAGTGATGTATATGATGTTCCTCCATCCAATCTCCATGAACAGGAGAAACGGTTGAAGGAGACAGTAAAAAAACATCCACATGTGTACCCAACAAATATTTCCATATAG 1350 0.4185 MSMNTMIRKSTTILTYFKSNYNNFFSTSTRRKPNLTNHHPRRFNSTTSPNPIHDQVIDFPGGNLKFIPQMTFLSESQQHRVPCYRVLDDNGEPIFGTDFVQVSEDFAVKMYNNMVALQTMDTIFYEAQRQGRISFYVTTNGEEAINIASAAALSMNDVIFPQYREQGVLLWRGFTLQEFANQCFSNKFDNGKGRQMPAHYGSNKHNYMNVASTVATQIPHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAGLNFAAVMEAPVIFICRNNGWAISTPTSDQFRSDGIVVKGQAYGVRSIRVDGNDALAIYSAVQAARQMAVSEERPILIEALTYRVGHHSTSDDSTKYRPANEIEWWRLSRDPVARFRKWIERNGWWNDMAESELRNSLRQQLLQTIQVAESVEKPPLADMFSDVYDVPPSNLHEQEKRLKETVKKHPHVYPTNISI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3363 449 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 84 444 IPR029061 -
Mtr3g3363 449 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 37 448 - -
Mtr3g3363 449 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 37 448 - -
Mtr3g3363 449 MobiDBLite consensus disorder prediction 28 52 - -
Mtr3g3363 449 Gene3D - 52 448 - -
Mtr3g3363 449 CDD TPP_E1_PDC_ADC_BCADC 110 402 - -
Mtr3g3363 449 Pfam Dehydrogenase E1 component 113 408 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3363 Mtr-Chr3 47520647 47523919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3363 55 287 Acyl Lipid Metabolism Gene Families AT5G09300 78.112 1.29e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3363 K00166 - gmx:100779198 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3363 3 47520647 47523919 Mtr3g3363 3 47520647 47523919 ECH