Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3350 ATGCCGATCGAAATGCCTCAAGGATTACCATTCTCTGTAGACACATGGACTCCATCATCCAAAATCAGCAAAAGGCATCATTTCATCACACACGCTCACAAAGATCATTCTTCAAACATCACTTCTCATTCCTCTTTCCCAATTTACTCTACTTCCCTCACCAAAACCCTCCTCCTTCAACATCACCCTCAGCTTGATGCTTCTTTGTTTCTGGTAATTGAAGTTGGTCAATCCTTGATTGTCGATGATCCTGATGGAAACTTCACCGTTACCGCTTTTGATGCCAATCACTGTCCAGGGGCAGTGATGTTCTTGTTTGAAGGAAAATTTGGCAATATTTTACACACAGGAGATTGCAGGCTCACCCTTGAATGCTTGTTCAATTTACCTGTCAAGTATGTAGGGACGAAAGGAAAGAAGCCGCGTTGTCCTCTTGATTGTGTTTTCTTAGACTGTACTTTTGGCGATTTCGCTCGTGCCATGCCTACTAAGCATTCCTCTATTCAACAGGTTGTTAATTGTATATGGAAGCATCCTGATGCATCGACAGTGTATCTTACCTGTGATATCCTTGGACAGGAAGACATTCTTGTTCAAGTGTCCCAAACATTTGGAGCGAAGATATATGTTGATAAAGCCCAAAATCCAGAATGTTTCAAGAATTTCATGGTTACGGTGCCTGAAATTGTTTGTGAAGATCCATGTTCTCGTTTTCATTTATTTGATGGATCTCCAGGACTATATGAAAGAGCACAATCAAAACTGGTTGAGGCCAAGGCAACTCTCCAGACTGAGCCTCTCATCGTCCGCCCTTCGGCTCAATGGTATGCATGTGAAGAGTTATCAGATGTTCAAAACACTAAAAAGAAGAGAATGAACGAAGCAGTTAAGGATCAATTTGGTGTTTGGCATGTCTGTTACTCAATGCACTCCTCCAAGGAAGAATTGGAAGAGGCACTTCAACTTCTTGCTCCAAGGTGGGTTGTTTCCACAACCCCTCCCTGCAGGGCAATGCAGCTCAATTATGTCAAGAAATACTGTTTTAATTCTAAAGTCAGTCTCAATAACTCAGTGGTAAAGCTTTTGGGTATGGCTGTGGAAACTTACGGCGATGTTGATGCATTTGTCAAACCTGTAAACTGTTATCCTGTGCTTCAAGGGACCGCTCAGCCTTGTGCACAAACTAAATCACCTGTCAAGCAGTGCACTGATGTAAAAGCACTGGAAAAATTAACTCTTCCTGTTAATCGCTCGCCTGTCACATTATTTGGAAGAGCAAGACTTGGTCTCAAAGATGTCGACTTTTTACGAGGAGGGTGTAATCTTTTACCGGTTAATGTCCCTTTGCAAACAGTTTCAAGTGGCCCAAAACAAGAATTCCTGGATGATGCTGTTGAAGTGAAATGGGAGAGGTCGCCAGGAAGAAAGGAAGATTTACATAATGTGGATCAGCAATCTGAGGTCCAGGAAAACACAAAAGTTCATAAGAGTGCGTCTTATGAAAATATTGGATCCCCAGGCTTTAGTGAACATGTCAGAAAGTATTACAGGTCAATGAATCTTCCTGTGCTTCGGCCTCTTCCCTCATTAGTGGAACTTATGAATTCCAGGAAACGTGCCAAGAGGGGAATCAATCATTAA 1641 0.4223 MPIEMPQGLPFSVDTWTPSSKISKRHHFITHAHKDHSSNITSHSSFPIYSTSLTKTLLLQHHPQLDASLFLVIEVGQSLIVDDPDGNFTVTAFDANHCPGAVMFLFEGKFGNILHTGDCRLTLECLFNLPVKYVGTKGKKPRCPLDCVFLDCTFGDFARAMPTKHSSIQQVVNCIWKHPDASTVYLTCDILGQEDILVQVSQTFGAKIYVDKAQNPECFKNFMVTVPEIVCEDPCSRFHLFDGSPGLYERAQSKLVEAKATLQTEPLIVRPSAQWYACEELSDVQNTKKKRMNEAVKDQFGVWHVCYSMHSSKEELEEALQLLAPRWVVSTTPPCRAMQLNYVKKYCFNSKVSLNNSVVKLLGMAVETYGDVDAFVKPVNCYPVLQGTAQPCAQTKSPVKQCTDVKALEKLTLPVNRSPVTLFGRARLGLKDVDFLRGGCNLLPVNVPLQTVSSGPKQEFLDDAVEVKWERSPGRKEDLHNVDQQSEVQENTKVHKSASYENIGSPGFSEHVRKYYRSMNLPVLRPLPSLVELMNSRKRAKRGINH* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3350 546 Gene3D - 160 310 - -
Mtr3g3350 546 Gene3D - 9 331 IPR036866 -
Mtr3g3350 546 Pfam DNA repair metallo-beta-lactamase 231 335 IPR011084 -
Mtr3g3350 546 SUPERFAMILY Metallo-hydrolase/oxidoreductase 26 335 IPR036866 -
Mtr3g3350 546 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 447 - -
Mtr3g3350 546 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 470 544 - -
Mtr3g3350 546 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 470 544 - -
Mtr3g3350 546 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3350 Mtr-Chr3 47448982 47452554 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3350 K15340 - gmx:100807948 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3350 3 47448982 47452554 Mtr3g3350 3 47448982 47452554 ECH