Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3334 ATGACAAAGTTCAGGAAGCTCAATCGTGACACGTCTCACCGGTTATCCATGCTCAGAACCATGGTCTCGCAATTGGTGAGGCACGAACGCATTGAAACTACTATTACCAAGGCTAAGGAGGTTAGAAGGCTTGCGGATAATATGGTACAGCTTGGTAAAGAGGGATCCGTATGTGCTGCAAGGCGCGCTGCTAGTTTCGTGCGAGGAGACGATGTTCTTCACAAGCTGTTTACAGAACTGGCTTATCGATACAAGGATAGAACTGGTGGATACACTAGGGTGCTACGGACTCGCATTCGAGTTGGTGATGCTGCACCAATGGCCTATATTGAGCTTATTGATCGTGATAATGAGCTTAGGCAGTCAAAGCCACCAACTCCTCAACCACCGCAGAGAACACCCCTTGATCCCTGGACACGATCTCGTCTTACCAGGCAGTTTGCACCTCCCAAAGTGGAAAAATCTGATTCTGATTCTGATTTAATCTAA 489 0.4744 MTKFRKLNRDTSHRLSMLRTMVSQLVRHERIETTITKAKEVRRLADNMVQLGKEGSVCAARRAASFVRGDDVLHKLFTELAYRYKDRTGGYTRVLRTRIRVGDAAPMAYIELIDRDNELRQSKPPTPQPPQRTPLDPWTRSRLTRQFAPPKVEKSDSDSDLI* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3334 162 Gene3D Ribosomal protein L17 1 113 IPR036373 GO:0003735|GO:0005840|GO:0006412
Mtr3g3334 162 SUPERFAMILY Prokaryotic ribosomal protein L17 3 116 IPR036373 GO:0003735|GO:0005840|GO:0006412
Mtr3g3334 162 PANTHER BNAA09G06940D PROTEIN 1 160 - -
Mtr3g3334 162 Pfam Ribosomal protein L17 17 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mtr3g3334 162 TIGRFAM L17: ribosomal protein bL17 4 114 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mtr3g3334 162 MobiDBLite consensus disorder prediction 116 162 - -
Mtr3g3334 162 PANTHER RIBOSOMAL PROTEIN L17 1 160 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mtr3g3334 162 MobiDBLite consensus disorder prediction 147 162 - -
Mtr3g3334 162 Hamap 50S ribosomal protein L17 [rplQ]. 2 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3334 Mtr-Chr3 47283613 47287684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3334 K02879 - dcr:108206570 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3334 3 47283613 47287684 Mtr3g3334 3 47283613 47287684 ECH