Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3330 ATGATGGTTCCTCAACCGCCCCTCGTTGCCGCTGAAAAGATAAACATCTGTCTAACATGTGGTAGTAAGGGAGATTCAAAGCGCCTCGTATACTGTATCCAGTGTAAATCTTGTGCTCAACATAGTTATTGTCTAGAGAAGATCCACCGGGATGATAATAGGACAGTAATCTGGAAATGCGAGGAGTGTGCTCCAAGTAATCCAAAACGCAAAACGGAACCGTTACGAAAAAGTGAACGCATAAGTTATGCAACTGATGCTAAGTATAAAAGGATGATAATGAAAAAGAAGAGCGGTGTAGTTGGAAAACAACCACTTGTCAAATCAAATGAAGGTGAAAGTGTTGGATGCCTTGCCAAAAAGAACACTGAGATGATACTGCCAATCCTTGAGAATGAAAATGTTTTTTGCAAGCAGCCTGAATCACCTAAAGATCCTTCGAATATGTCATCTGACATGCAGGCAATGGAATGTGAGATATATACAGAGTCTGAAGTCATAATGCCTCCGTTACTGCAGTATCCAGAGTTTGACAAAAATAGCCGTGCTCAGCCACTAAGTGATCCGGTTTGGACGGGGCAATTTAGAATGCACAATGCAACACATTTTAATCTTACTGCATATATATCAAGTAAAGCTTATCCAAAAGTGAATTCTGCAGTAACAGTTCTCCCTGAACTGCTTGATGTAGAGATGTTATCAAAACGTATCATTTGGCCCAAGCGTTTTGCTGCCTGTCCACCTAATAGTGATTGTATTGGGCTCTATTTTTTTCCCCAGTATGAAAGGGATGAGATGATCTTTGATCGTGTGCTGGACAACGTGATTGAAAAAGATAATGCTCTCAAAGCAGTCATTAACAACAACCTGGAACTCTTAATATTTTCCTCACATTTATTACCTCCGGATGAAAGGCGAATCTGCACAAAATATTACTTGTGGGGTATTTTCAAATCAAAGCCAAGAAAATAG 972 0.3992 MMVPQPPLVAAEKINICLTCGSKGDSKRLVYCIQCKSCAQHSYCLEKIHRDDNRTVIWKCEECAPSNPKRKTEPLRKSERISYATDAKYKRMIMKKKSGVVGKQPLVKSNEGESVGCLAKKNTEMILPILENENVFCKQPESPKDPSNMSSDMQAMECEIYTESEVIMPPLLQYPEFDKNSRAQPLSDPVWTGQFRMHNATHFNLTAYISSKAYPKVNSAVTVLPELLDVEMLSKRIIWPKRFAACPPNSDCIGLYFFPQYERDEMIFDRVLDNVIEKDNALKAVINNNLELLIFSSHLLPPDERRICTKYYLWGIFKSKPRK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3330 323 SUPERFAMILY FYVE/PHD zinc finger 12 75 IPR011011 -
Mtr3g3330 323 PANTHER - 8 323 - -
Mtr3g3330 323 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 8 323 - -
Mtr3g3330 323 ProSitePatterns Zinc finger PHD-type signature. 17 63 IPR019786 -
Mtr3g3330 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 89 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3330 Mtr-Chr3 47238025 47243417 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3330 - - gmx:102668229 394.815