Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3320 ATGACAACAACATCCTCACACGCTCAAACCGAAGCAGCAAAAACAGAACAAATAATCACAGAATTCTTCGCAAAAAGCCTCCACATAATAATCGAATCAAGAGCACTTTCTGCTTCATCTCGCAATTTCAGCACCCTTTCTTCACCATCTTCAACTTCTTCATCTTCCTCATCAAGTGTTCGACCCAGAGACAAATGGTTCAATCTAGCACTCAGAGAATGTCCTACAGCGCTTGAAAACACTGACCTATGGCGCCACAGTAATCTTCAGCCAATTGTGGTTGATGTTGTTTTGGTTCATAGAAACCTTAGTTTCTCTCCGAAGGTTCGATCTTTTGTAAAAGAGAGAAACCCCTTTGAAGAATTCGGAGGTGGGTCTGAACAGAATGAGAAGATTGTTGAAAGATGGGTTATTCAATATGAAAGCAAGAAAATTAAGGATTGTTCTAGTTCCAACACTGCAAACACTACAAGAAGGTCAAGTAATACTTTTTTGCAGAATTTGTATAAGAAATCTACTTTGCTTTTAAGGTCTTTGTATGCTACTGTTAGGCTTTTACCTGCTTTTAAGATTTTTAAGGAACTTAGTTCATCTGCAAATGTTTCTGCTTTTAGTCTTGCTCATCGTGTTTCGACTTTCTTTGAACCATTTACTACTAAACAAGAAGCTGAAATGCTTAAGTTTGTGTTCACTCCTGTGGATACTAATTCCGGTAAGCTGTGTTTATCGGTGATGTATCGACCATGTGTTTCTGATGTGAGTTCGGAACCAACGACTCCTTTGTCTCCACAAGTTATAACTGATTATGTTGGGAGTCCTTTGACTGATCGGTTGATGAGGTTTCCGTCGCTTCCTGTTGTTAGAATGCCATCACATGGCTCTTCTCCGTCGTCATTGCCATTTTCGAGGAGACATAGTTGGAGTTATGAAAATTGTAGAGCATCACCTCCTGCAGTTAATTATTATTCGCCTTCACCTACACATTCGGAATCACACACATTGGTTTCTAATGCTAGCTCTCAAGGTTATTGTCCACCCTCTAGTTTGCCTCCTCATCCAAGTGAAATGTCTTTGCTTCATAAGAAGAATGTGAATTTCGATGAGTACTATCCCTCGCCGAATTTCTCTCCATCACCCTCTCCTTCTTCATCATCACCAATCTATAGTTTGGGTTCGTTAGCTTCGAAAACTCTTTTACGCTCTGAAAGTGCTCCTGTCAATATACCAAATGCTGAAGTTACGTATTCCCCTGGACATACCAGTAGGCAGAATTTGCCACCGTCTACTCCTATTAGAATTTCAAGGTGCACTTCTGAGACAGAAAGAAGTAGGAATCTTATGCAATCGTGCACCACACCTGAGAAGATGTTTTCAATCGGAAAAGAGTCTCAAAAATATTCCGGAGGGAAGATAGCACCTAACAGCTCGCCACAGATTTCATTTTCCAGGAGCTCTAGCAGGTCTTATCAGGATGAGTTTGATGATACTGATTTTACTTGTCCTTTCGACGTGGATGATGACGATACAACGGATCCAGGCAGCAGAGCGGAATCTTTCGATCGTGGTGATATGACTCAACTTCTTGAAGCTGGTAGGTTCTTTCCAATCAGAAAGTCTCAAGGTGCCGCTGTTGGTGCACTTGTGCATATGTTGAAGAAAGCAGCACCTCTGCATCAAGACTTCTCCACTGGTGAAAACTTGTCTCAGGGCGCCCGTGCTGAAAACTTGAAGAGCAATAACTTTCAAGAGCCGAACCAGATTCTAGAGAGCCTAACACCAGTGAGCACAATGTCTTCTGGGAATAGGAAAACAACAAGTGATGCATTGGAAGAGTTTCATAGTTACAGAGAAATGAAAAACTTATTACTTATGCCACGTGATGGCAGTAAGCGACAAATATGA 1902 0.4132 MTTTSSHAQTEAAKTEQIITEFFAKSLHIIIESRALSASSRNFSTLSSPSSTSSSSSSSVRPRDKWFNLALRECPTALENTDLWRHSNLQPIVVDVVLVHRNLSFSPKVRSFVKERNPFEEFGGGSEQNEKIVERWVIQYESKKIKDCSSSNTANTTRRSSNTFLQNLYKKSTLLLRSLYATVRLLPAFKIFKELSSSANVSAFSLAHRVSTFFEPFTTKQEAEMLKFVFTPVDTNSGKLCLSVMYRPCVSDVSSEPTTPLSPQVITDYVGSPLTDRLMRFPSLPVVRMPSHGSSPSSLPFSRRHSWSYENCRASPPAVNYYSPSPTHSESHTLVSNASSQGYCPPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSPSSSSPIYSLGSLASKTLLRSESAPVNIPNAEVTYSPGHTSRQNLPPSTPIRISRCTSETERSRNLMQSCTTPEKMFSIGKESQKYSGGKIAPNSSPQISFSRSSSRSYQDEFDDTDFTCPFDVDDDDTTDPGSRAESFDRGDMTQLLEAGRFFPIRKSQGAAVGALVHMLKKAAPLHQDFSTGENLSQGARAENLKSNNFQEPNQILESLTPVSTMSSGNRKTTSDALEEFHSYREMKNLLLMPRDGSKRQI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3320 633 MobiDBLite consensus disorder prediction 323 356 - -
Mtr3g3320 633 PANTHER UNCHARACTERIZED 9 629 IPR040182 GO:0000045
Mtr3g3320 633 MobiDBLite consensus disorder prediction 409 432 - -
Mtr3g3320 633 MobiDBLite consensus disorder prediction 323 345 - -
Mtr3g3320 633 MobiDBLite consensus disorder prediction 468 487 - -
Mtr3g3320 633 MobiDBLite consensus disorder prediction 462 519 - -
Mtr3g3320 633 Pfam Autophagy-related protein 13 19 249 IPR018731 GO:0006914|GO:1990316
Mtr3g3320 633 Gene3D HORMA domain 3 252 IPR036570 -
Mtr3g3320 633 MobiDBLite consensus disorder prediction 42 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3320 Mtr-Chr3 47133358 47139855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3320 K08331 - gmx:100798585 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3320 3 47133358 47139855 Mtr3g3320 3 47133358 47139855 ECH