Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3307 ATGGCGTTGTTACCAATTCTGCACCTGCTCCTTTTACCATTACTCATCTATCAAGCCACCATTCCCTCAGCCGCTGTGGATCCCACAATAGGGTTCACTCGTCTCTCATTAGATAGCTCAAACTTTATTGTTCAAAAGCCTTACGATGTCTCACAAAGCGAGCGTTACAGCTTTATAAACGGTGTGCACAAATTTTGGATATACCCAACAGACAAGCCTTTTGAGACTGGCAGCTCAACACAACCAAGAACCGAGATTCGTATTAGGGGGTACGATTATACATCTGGTGTATGGCAATTTGAAGGGCAGGGTTATGTTCCAGGGGGCACATCAGGAGTGTGTATTATGCAAGTGTTTGGTGCAAATCCTACTTCGACAACCTCACAGCTTAGGGTCTATGATGGTTCATTAAATTATTATAGGGATCCTGTTCTGTCTCCAAATATCTATAATAGGTGGTTCAAGGTGAACGTTATTCATAATGTGGGTGCTAACAATGTTAAGGTTTATATTGATGGTGATCTCAAGTATGATACTTCTGGTCGTGGAGATGCCAATCACTACTTCAAATTCGGGGTTTATGTTCAGAATGATCCTTCCAGCTACATGGAATCTCGTTGGAAAGATATTAAACTTTTTAGAAGATAG 648 0.4136 MALLPILHLLLLPLLIYQATIPSAAVDPTIGFTRLSLDSSNFIVQKPYDVSQSERYSFINGVHKFWIYPTDKPFETGSSTQPRTEIRIRGYDYTSGVWQFEGQGYVPGGTSGVCIMQVFGANPTSTTSQLRVYDGSLNYYRDPVLSPNIYNRWFKVNVIHNVGANNVKVYIDGDLKYDTSGRGDANHYFKFGVYVQNDPSSYMESRWKDIKLFRR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3307 215 PANTHER ALGINATE LYASE 1 215 - -
Mtr3g3307 215 Pfam Alginate lyase 38 212 IPR014895 -
Mtr3g3307 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 202 IPR013320 -
Mtr3g3307 215 Gene3D - 34 214 - -
Mtr3g3307 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3307 Mtr-Chr3 47022732 47023933 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3307 - - dcr:108217991 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3307 3 47022732 47023933 Mtr3g3307 3 47022732 47023933 ECH