Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3306 ATGGCTTTCTTTTTGAAACTGTTTATTATCATATCCTTGTCGACAATAGTTACAGCAACGTCATTGAGCTCAACAAAAACCCTAGCATCACGTTTAGAATTATTTGATGGAAGTGGCCCCAACAACAAATGTTGGGAGACAATGTTGGAGCTTCAACATTGTACTGGTGATATTGTTACATTTTTCCTTAATGGTCAGACACATCTTGGATCTGGTTGTTGTAATGCTCTTCTTACTATAGCTCAAGAATGTTGGGGAAATTTGCTTACCTCGTTGGGTCTCACGGTAGAAGAAGCTGAAATTCTACGTGGCTTTTGTGCTCGTGTTGCCTCTGTTAACAATTCTCTTTTACCATCTATCACTGTTGATGCCCCTTCACCTGCACCTATCAACAATTATTGA 402 0.393 MAFFLKLFIIISLSTIVTATSLSSTKTLASRLELFDGSGPNNKCWETMLELQHCTGDIVTFFLNGQTHLGSGCCNALLTIAQECWGNLLTSLGLTVEEAEILRGFCARVASVNNSLLPSITVDAPSPAPINNY* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3306 133 Pfam Prolamin-like 43 107 IPR008502 -
Mtr3g3306 133 PANTHER EGG CELL-SECRETED PROTEIN 1.5 7 119 IPR044711 GO:0009567
Mtr3g3306 133 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 7 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3306 Mtr-Chr3 47021136 47021537 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3306 - - mtr:MTR_3g095330 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3306 3 47021136 47021537 Mtr3g3306 3 47021136 47021537 ECH