Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3296 ATGGCTTCTACTGCAACAACCACTCTCTTCATCTCCTCAGAATTCAAACCAAATCTCCCCAATTCCCTTCTTTTGCCACGAATTCGTATCTGCAACAAACCCTTATCAATTTCACTTCAACCATCGAAATTCCGTGCAACCCATTTATCACTATGCAATTGTTCCCGCACTCCATTAACACCCTCCACAATTTTCTCTCCTCAAACAACTTTAACCAACTTCATTTCACAAAAAATTTCATTTTTTCTCATTGGGTCGTTCATCTTCGTCGCTTGCTTCAGCAGAAAACCCGCTTTTGCAGTTTCAGTACCTTCTGTTGATTCAGCTGAAATTTTGGAGGAAAAGATTTTGGAGAAGGATTCAAGAAATGTTGAGGCTCTTAAAGTGATTGTGTATGGGAAAATTAGGAGAGGGAAGTGCAAAGAAGCTGAGAAGTTTGTGAAGAGGTTGATTGATGAGGAACCAAATGAGGTTGAGTGGAGGCTTTTGCTTGCATTGTGTTATGAGACAATGGGGTATTTGAGTAAGGCTAAAGGATTGTATTTGGAAATTTTGGAGAATTGGCCTCTTTTTGTTAGAGCTCTTCATGGTTTGGCTATGGTGATGCACAAAAACAAAGAGGGTCCTGCTGTATTTGAAATGCTGAACAAGGCTGTAGAGTTAGCTATTAATGAAAACAAAGTTACGGAGGAGAGAAATATAAAGATCTTAACTGCACAAATGCGTGTTGTACAGGGTGATTTGGAGGAGGGCTTGAAAAGATGTCAAGATTTGATTGATCAAAATCCTCGAGATTTTAGGCCTTATCTTTGCCAGGGAATAATATACAGTCTTCTGGATAAAAAGGAGGAAGCTGCAAAACAGTTTGAAACATATCAAGCTCTTGTGCCTGAAGAGTTTCCACAGAGGGGATTTCTTGATGATATCACCTTAGCAGCAAAAGGAACATCCCCAGTACAGTTTCAGAAGGAATTCAGAAATCAATTTTCTGACCAAAAATAG 1002 0.3932 MASTATTTLFISSEFKPNLPNSLLLPRIRICNKPLSISLQPSKFRATHLSLCNCSRTPLTPSTIFSPQTTLTNFISQKISFFLIGSFIFVACFSRKPAFAVSVPSVDSAEILEEKILEKDSRNVEALKVIVYGKIRRGKCKEAEKFVKRLIDEEPNEVEWRLLLALCYETMGYLSKAKGLYLEILENWPLFVRALHGLAMVMHKNKEGPAVFEMLNKAVELAINENKVTEERNIKILTAQMRVVQGDLEEGLKRCQDLIDQNPRDFRPYLCQGIIYSLLDKKEEAAKQFETYQALVPEEFPQRGFLDDITLAAKGTSPVQFQKEFRNQFSDQK* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3296 333 PANTHER OS05G0182100 PROTEIN 1 319 - -
Mtr3g3296 333 Gene3D Tetratricopeptide repeat domain 105 234 IPR011990 GO:0005515
Mtr3g3296 333 SUPERFAMILY TPR-like 107 298 IPR011990 GO:0005515
Mtr3g3296 333 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 319 - -
Mtr3g3296 333 Gene3D Tetratricopeptide repeat domain 235 303 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3296 Mtr-Chr3 46858102 46861034 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3296 - - aprc:113852504 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3296 3 46858102 46861034 Mtr3g3296 3 46858102 46861034 ECH