Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3290 ATGGAGCAAAATAAAGAGAAAATCGCCCCTTGGCTATCGGTGCCACAGTTTGGCGAATGGGATCAGAAGGGCCCATTGCCGGACTATTCCATGGATTTTTCGAAAATTAGGGAAATGCGAAAACAGAACAAGACCAATGCTTCAAGAGCAAGTCTTGGCAATGAGGAGGAGTTTGCGGCTCCTACTCAGAAGAACGTAAAGGCCGATCACAGCGAGCCCCAGCATCCTCACTACCACAAAACCAATTCTGCAGTGAGAAGGAGGAGCTTCATGAGCTACTTCAACTGTTGCATTAAAGCCTGA 303 0.4752 MEQNKEKIAPWLSVPQFGEWDQKGPLPDYSMDFSKIREMRKQNKTNASRASLGNEEEFAAPTQKNVKADHSEPQHPHYHKTNSAVRRRSFMSYFNCCIKA* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3290 100 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 99 - -
Mtr3g3290 100 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 1 99 - -
Mtr3g3290 100 MobiDBLite consensus disorder prediction 41 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3290 Mtr-Chr3 46811810 46814550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3290 - - gmx:100796591 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3290 3 46811810 46814550 Mtr3g3290 3 46811810 46814550 ECH