Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3286 ATGACGAAGAACCAAAACTCGAACCTGATCCCATCCCTCCCAGACGATGTAGCCATAAACTGCCTTGCACGGGTCCCACGTTCTCACCACACAACCCTCACCCTCGTTTCCAAACCAATCCATTCTCTCCTCTCTTCTTCGCTCTTCTTCACCGCTCGCTCTCTCATCCCTTCCACCCAACACATCCTCTACCTCTCTCTCCGCACACGCTCCACCTCTCTCCAATTCTTCACCCTCCACAATAACCACCGTCTCCTCCCTCTCCCTCCTCTTCCCTCCCCTACCATCGGGTCCGCCTACGCTGTCATCCACCACAAAATCTATCTCATCGGTGGTTCCGTCAACGATGTACCCTCTCGTCATGTATGGATCCTTGATTGCCGATTCCACCGGTGGCTCCCTGGTCCTTCAATGCGCGTGGCGCGTGAATTCGCAGCTGCTGGTGTTATCGACGGGAAAATCTACGTCATCGGTGGTTGCGTGCCGGATAATTTTTCCAGATCAGCTAATTGGTCGGAGGTTTTCGATCCTGTTAACAACCGCTGGGAAAGTGTTCCTAGTCCACCAGAAATTCGTGAGAAATGGATGCACGCGAGTGCCGTCGTAGACGGCAAGGTTTACGCAATGGCGGATCGCGGTGGTGTTTCGTTTGATCCTTATAACGGCGCGTGGGAGAGCGTTGGGAGGGAGCTTGATATAGGTTGGCGTGGGAGAGCAACTGTTGTGGATGGGATTTTGTATTGTTATGATTATTTAGGGAAAATTAAGGGTTTTGATGTGAAGAAAGGGTTGTGGAAGGAGTTGAAAGGTTTGGATAAGAGTTTACCAAGGTTTCTGTGTGGGGCTACAATGGCTGATGTTGGTGGGAAATTGGTTGTGGTTTGGGAGTGTCAAAGGAATTTGAATGGGAAGGGGAAAGAAATGGAGATTTGGTGTGCTGAGATTGATGTGAAGAAGAAGAAGAAGAAGAATAAGGATGGTGAATTATGGGGTGAAGTTTGTTGGTTAAATAATGTTCTTTCTGTTCCTAAAGGATCTTCCATTGTTCATTGTAATTCTGTTGCATTGTGA 1071 0.4874 MTKNQNSNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQHILYLSLRTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDCRFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEVFDPVNNRWESVPSPPEIREKWMHASAVVDGKVYAMADRGGVSFDPYNGAWESVGRELDIGWRGRATVVDGILYCYDYLGKIKGFDVKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNGKGKEMEIWCAEIDVKKKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCNSVAL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3286 356 SUPERFAMILY Kelch motif 81 339 IPR015915 GO:0005515
Mtr3g3286 356 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 3 339 - -
Mtr3g3286 356 Gene3D - 56 326 IPR015915 GO:0005515
Mtr3g3286 356 SUPERFAMILY F-box domain 4 96 IPR036047 GO:0005515
Mtr3g3286 356 SMART kelc_smart 106 152 IPR006652 GO:0005515
Mtr3g3286 356 SMART kelc_smart 153 204 IPR006652 GO:0005515
Mtr3g3286 356 Pfam Kelch motif 98 139 IPR006652 GO:0005515
Mtr3g3286 356 Pfam Kelch motif 142 189 IPR006652 GO:0005515
Mtr3g3286 356 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 3 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3286 13 340 Miscellaneous Gene Families AT4G33900 35.854 3.30e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3286 - - gmx:100798508 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3286 3 46754262 46756557 Mtr3g3286 3 46754262 46756557 ECH